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  • SUMMARY

  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:97.3 nTPM
HPA Brain:79.1 nTPM
GTEx:97.3 nTPM
Pig:134.7 nTPM
Mouse:125.1 nTPM
Allen mouse:3.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 59.7
2226 Male, age 75, left hemisphere 68.5
1961 Female, age 42, unknown 51.0
Dorsomedial nucleus
nTPM: 55.4
2041 Female, age 72, unknown 63.2
1989 Male, age 62, unknown 57.5
2017 Female, age 42, unknown 45.5
Lateral hypothalamic area
nTPM: 61.1
1791 Male, age 80, right hemisphere 75.5
2271 Male, age 75, both hemispheres 61.5
2228 Male, age 66, unknown 59.7
2412 Male, age 62, unknown 47.7
Mammillary body
nTPM: 79.1
1923 Female, age 72, unknown 116.4
2413 Male, age 66, unknown 76.2
1948 Female, age 72, unknown 72.8
1945 Male, age 80, right hemisphere 65.9
1834 Female, age 42, unknown 64.2
Paraventricular nucleus
nTPM: 45.2
2700 Male, age 62, unknown 45.2
Preoptic area
nTPM: 57.3
1907 Male, age 80, right hemisphere 67.0
1861 Female, age 42, unknown 57.8
2414 Female, age 72, unknown 47.3
Supraoptic nucleus
nTPM: 62.9
1894 Female, age 72, unknown 80.3
2043 Male, age 62, unknown 58.4
2835 Female, age 72, unknown 50.1
Ventromedial nucleus
nTPM: 61.2
1982 Female, age 72, unknown 66.5
1822 Female, age 42, unknown 56.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 97.3
Samples: 257

Max nTPM: 209.5
Min nTPM: 52.3
Std nTPM: 19.2
Median nTPM: 96.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 209.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 170.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 145.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 143.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 142.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 137.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 132.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 132.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 129.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 129.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 128.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 127.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 126.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 126.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 125.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 125.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 125.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 124.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 123.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 122.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 122.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 121.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 120.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 118.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 118.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 118.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 118.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 118.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 118.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 118.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 118.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 117.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 117.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 117.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 117.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 117.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 117.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 116.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 115.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 114.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 114.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 114.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 113.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 113.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 112.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 112.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 112.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 112.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 112.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 112.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 112.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 111.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 111.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 111.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 110.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 110.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 110.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 110.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 110.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 110.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 110.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 109.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 109.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 109.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 108.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 108.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 107.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 107.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 107.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 107.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 106.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 106.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 106.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 106.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 105.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 105.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 105.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 105.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 105.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 105.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 104.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 104.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 104.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 104.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 103.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 103.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 102.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 102.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 102.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 102.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 102.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 102.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 102.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 102.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 101.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 101.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 101.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 101.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 101.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 100.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 100.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 100.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 100.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 100.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 100.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 100.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 100.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 99.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 99.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 99.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 99.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 98.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 98.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 98.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 98.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 98.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 98.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 98.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 97.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 97.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 97.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 97.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 97.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 97.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 97.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 96.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 96.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 96.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 96.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 95.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 95.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 95.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 95.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 95.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 95.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 95.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 95.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 95.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 95.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 95.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 94.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 94.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 94.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 94.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 94.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 94.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 94.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 94.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 93.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 93.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 93.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 93.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 93.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 93.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 93.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 93.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 92.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 92.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 92.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 91.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 91.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 91.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 91.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 91.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 91.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 90.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 90.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 89.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 89.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 89.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 89.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 89.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 89.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 88.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 88.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 88.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 88.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 88.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 88.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 88.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 88.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 88.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 87.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 87.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 87.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 87.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 87.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 87.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 86.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 86.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 85.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 85.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 85.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 84.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 84.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 84.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 84.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 84.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 84.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 83.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 83.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 83.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 83.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 83.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 82.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 82.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 82.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 82.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 82.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 82.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 82.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 81.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 81.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 81.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 81.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 80.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 80.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 79.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 79.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 78.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 78.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 78.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 77.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 77.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 77.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 76.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 76.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 76.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 76.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 75.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 75.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 75.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 74.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 74.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 74.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 73.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 72.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 72.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 70.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 70.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 69.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 68.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 68.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 68.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 66.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 66.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 63.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 63.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 62.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 61.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 60.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 60.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 57.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 56.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 56.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 55.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 52.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 134.7
Samples: 4

Max nTPM: 181.5
Min nTPM: 93.8
Sample A Female 181.5
Sample B Female 161.1
Sample C Male 102.3
Sample D Male 93.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 125.1
Samples: 4

Max nTPM: 130.6
Min nTPM: 121.3
Sample A Male 121.3
Sample B Male 125.1
Sample C Female 130.6
Sample D Female 123.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.7
70743842 Antisense, RP_050725_01_G04, Mouse strain C57BL/6J (56 days, male) 6.3
633302 Antisense, RP_040907_02_F10, Mouse strain C57BL/6J (56 days, male) 1.0

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