HTRA1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • HTRA1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:242.7 nTPM
GTEx:596.9 nTPM
FANTOM5:226.4 Scaled Tags Per Million
Macaque:146.3 nTPM
Pig:107.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

242.7
Sample id Sample description nTPM
Putamen
nTPM: 242.7
2482 Female, age 94, left hemisphere 306.1
2489 Female, age 72, unknown 273.3
2466 Female, age 79, unknown 270.0
1829 Male, age 74, unknown 242.0
1937 Female, age 91, right hemisphere 207.7
1838 Male, age 80, right hemisphere 202.0
2647 Male, age 75, left hemisphere 198.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

596.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 596.9
Samples: 254

Max nTPM: 1615.1
Min nTPM: 95.5
Std nTPM: 257.7
Median nTPM: 557.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1615.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1354.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1344.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1301.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1291.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1163.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1161.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1147.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1111.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1110.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1107.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1078.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1076.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1066.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1052.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1048.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1036.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1033.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1023.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 995.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 963.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 962.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 942.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 935.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 935.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 934.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 933.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 924.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 921.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 921.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 920.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 919.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 918.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 916.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 904.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 903.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 896.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 892.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 888.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 886.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 878.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 876.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 857.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 853.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 845.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 839.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 834.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 822.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 815.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 807.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 802.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 790.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 785.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 784.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 783.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 780.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 779.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 776.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 770.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 768.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 763.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 755.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 752.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 745.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 741.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 736.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 735.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 733.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 727.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 722.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 722.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 721.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 719.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 708.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 706.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 704.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 702.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 701.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 700.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 700.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 699.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 696.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 693.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 692.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 691.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 684.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 683.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 678.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 676.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 676.9
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 674.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 673.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 672.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 672.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 671.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 661.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 659.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 659.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 658.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 657.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 640.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 640.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 626.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 619.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 618.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 616.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 616.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 612.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 612.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 612.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 611.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 611.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 610.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 608.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 608.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 603.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 601.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 599.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 589.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 586.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 580.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 574.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 570.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 566.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 562.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 561.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 559.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 555.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 553.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 549.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 548.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 547.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 545.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 543.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 540.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 539.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 536.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 533.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 528.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 520.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 515.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 512.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 510.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 507.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 506.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 502.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 501.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 501.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 498.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 497.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 496.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 491.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 488.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 483.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 475.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 470.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 467.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 463.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 462.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 460.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 460.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 459.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 457.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 454.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 454.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 452.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 450.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 449.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 445.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 445.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 439.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 439.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 439.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 435.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 433.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 429.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 427.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 422.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 419.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 410.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 409.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 407.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 406.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 404.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 400.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 398.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 398.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 397.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 397.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 394.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 393.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 391.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 390.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 389.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 386.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 385.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 384.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 382.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 380.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 380.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 371.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 369.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 368.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 362.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 360.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 356.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 354.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 351.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 350.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 346.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 346.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 345.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 344.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 336.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 336.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 335.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 334.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 330.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 328.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 327.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 326.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 321.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 321.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 316.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 313.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 310.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 308.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 304.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 301.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 287.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 286.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 283.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 282.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 280.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 279.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 277.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 276.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 273.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 272.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 260.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 260.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 258.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 252.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 251.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 250.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 249.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 249.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 240.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 234.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 225.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 210.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 199.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 183.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 95.5
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

226.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 226.4
FF:10176-103C5 60 years, female 226.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

146.3
Macaque sample Sample description nTPM
Putamen
nTPM: 146.3
Samples: 2

Max nTPM: 156.5
Min nTPM: 136.0
Sample A 136.0
Sample B 156.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.9
Pig sample Sample description nTPM
Putamen
nTPM: 107.9
Samples: 3

Max nTPM: 131.1
Min nTPM: 86.5
Sample B Female 86.5
Sample C Male 131.1
Sample D Male 106.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.