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  • NDUFB8
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:251.8 nTPM
HPA Brain:149.8 nTPM
GTEx:251.8 nTPM
FANTOM5:115.3 Scaled Tags Per Million
Pig:59.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 146.7
1981 Female, age 72, midline 174.0
2194 Female, age 79, both hemispheres 173.6
2565 Male, age 75, midline 153.0
2816 Male, age 47, midline 118.0
2048 Male, age 55, midline 114.8
Cervical spinal cord, dorsal horn
nTPM: 148.5
2173 Female, age 72, unknown 186.6
2069 Male, age 47, both hemispheres 157.8
2297 Male, age 75, both hemispheres 144.3
2296 Male, age 66, both hemispheres 138.8
1877 Male, age 55, unknown 131.7
2721 Male, age 90, both hemispheres 131.5
Cervical spinal cord, ventral horn
nTPM: 149.8
2068 Male, age 55, unknown 174.7
2480 Male, age 75, both hemispheres 171.4
2295 Male, age 66, both hemispheres 150.3
2809 Male, age 90, both hemispheres 143.8
2820 Female, age 79, both hemispheres 134.3
2098 Female, age 72, unknown 124.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

251.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 251.8
Samples: 204

Max nTPM: 461.0
Min nTPM: 123.3
Std nTPM: 61.8
Median nTPM: 250.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 461.0
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 451.9
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 443.0
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 416.2
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 410.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 409.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 402.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 388.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 383.7
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 380.1
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 376.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 367.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 361.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 348.9
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 343.2
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 340.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 339.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 335.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 335.0
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 329.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 329.3
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 328.7
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 320.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 318.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 315.1
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 311.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 310.1
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 309.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 305.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 304.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 300.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 300.5
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 295.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 294.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 294.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 294.2
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 292.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 292.4
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 292.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 291.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 290.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 290.4
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 290.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 290.1
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 289.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 287.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 286.5
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 286.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 285.4
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 285.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 285.2
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 284.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 284.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 284.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 283.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 283.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 282.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 282.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 282.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 280.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 279.5
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 279.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 279.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 277.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 276.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 276.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 276.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 275.1
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 273.8
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 273.6
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 272.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 270.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 270.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 270.0
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 268.2
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 267.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 267.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 266.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 265.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 263.6
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 263.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 262.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 262.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 262.0
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 261.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 261.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 260.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 259.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 259.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 259.0
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 258.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 257.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 256.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 256.0
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 255.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 252.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 252.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 252.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 251.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 251.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 250.9
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 250.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 250.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 245.4
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 245.4
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 244.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 244.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 244.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 243.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 242.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 241.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 241.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 240.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 240.4
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 240.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 240.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 239.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 238.0
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 237.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 237.1
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 235.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 235.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 234.9
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 233.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 233.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 233.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 233.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 231.8
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 231.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 230.7
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 230.0
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 226.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 226.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 226.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 224.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 224.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 223.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 223.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 223.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 222.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 221.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 221.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 219.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 218.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 214.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 212.0
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 211.3
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 210.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 209.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 208.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 208.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 207.3
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 205.2
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 203.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 201.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 201.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 200.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 199.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 198.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 197.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 197.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 196.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 195.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 194.8
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 193.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 193.0
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 192.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 192.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 189.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 189.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 189.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 189.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 189.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 189.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 188.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 188.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 188.6
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 186.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 184.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 183.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 178.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 177.5
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 176.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 175.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 174.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 174.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 172.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 171.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 171.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 171.3
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 170.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 168.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 167.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 166.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 163.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 159.4
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 158.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 155.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 154.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 146.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 144.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 143.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 140.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 123.3
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

115.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 115.3
FF:10181-103D1 60 years, female 150.5
FF:10159-103A6 76 years, female 80.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 50.6
Samples: 4

Max nTPM: 51.8
Min nTPM: 49.5
Sample A Female 51.8
Sample B Female 49.5
Sample C Male 51.6
Sample D Male 49.6
Ventral spinal cord
nTPM: 59.2
Samples: 4

Max nTPM: 67.5
Min nTPM: 50.1
Sample A Female 50.1
Sample B Female 67.5
Sample C Male 62.2
Sample D Male 57.0

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