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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • CKB
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:1254.9 nTPM
GTEx:1451.6 nTPM
FANTOM5:4390.9 Scaled Tags Per Million
Pig:1454.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1254.9
Sample id Sample description nTPM
Putamen
nTPM: 1254.9
2466 Female, age 79, unknown 1458.9
1829 Male, age 74, unknown 1438.1
1838 Male, age 80, right hemisphere 1317.9
1937 Female, age 91, right hemisphere 1258.7
2482 Female, age 94, left hemisphere 1189.4
2647 Male, age 75, left hemisphere 1151.2
2489 Female, age 72, unknown 969.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1451.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1451.6
Samples: 254

Max nTPM: 2610.3
Min nTPM: 520.2
Std nTPM: 412.2
Median nTPM: 1417.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 2610.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 2362.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 2349.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 2286.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 2273.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 2273.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 2229.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 2227.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 2194.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2183.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 2145.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 2136.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 2126.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 2116.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 2110.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 2104.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 2101.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 2095.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 2093.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 2077.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 2043.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 2041.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 2039.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 2037.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 2023.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 2019.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 2018.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2016.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 2010.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1981.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1981.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1970.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1968.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1963.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1961.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1956.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 1947.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1942.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1933.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1917.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1916.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1909.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1906.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1905.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1896.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1880.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1877.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1854.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1822.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1821.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1819.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1812.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1807.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1807.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1806.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1805.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1786.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1783.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1782.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1781.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1781.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1776.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1773.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1765.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 1752.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1751.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1745.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1732.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1714.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1709.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1707.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1703.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 1680.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1678.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1675.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1674.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1668.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1661.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1659.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1656.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1648.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1647.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1629.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1627.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1624.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 1620.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1615.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 1598.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1587.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1586.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1585.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1584.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1583.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1581.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1571.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1562.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1557.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1556.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1552.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1549.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1541.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1535.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1529.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1529.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1517.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1514.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1513.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1511.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1507.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1502.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1499.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1498.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 1498.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 1497.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1490.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1489.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1486.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1477.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1460.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 1458.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1451.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1445.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1445.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1438.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1429.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1429.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1421.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 1414.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1409.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1409.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1409.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1406.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1406.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1405.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 1401.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 1399.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 1397.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1395.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1382.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1381.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1380.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1375.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1374.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1373.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1367.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1365.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1365.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1356.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1346.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1344.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1341.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1332.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1328.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1326.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1324.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1312.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1305.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 1303.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1293.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1291.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1289.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1284.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1280.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1277.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1273.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1268.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1266.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1254.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1253.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1251.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1249.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1233.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1230.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1229.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1224.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1222.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1218.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1215.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1212.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1201.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1190.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1186.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1185.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1182.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 1178.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1177.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 1159.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1159.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1157.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1155.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1153.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1152.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1151.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1149.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1134.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1126.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1121.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1119.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 1116.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1102.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1100.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1098.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1092.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 1085.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1085.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1085.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1072.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1069.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1061.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1056.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1052.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1048.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1047.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1046.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1044.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1043.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1042.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1029.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1027.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1017.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1013.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1007.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1003.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1002.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 981.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 964.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 962.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 958.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 940.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 928.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 924.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 920.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 904.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 872.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 866.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 850.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 837.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 833.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 819.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 816.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 786.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 774.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 749.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 693.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 689.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 679.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 663.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 660.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 645.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 618.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 570.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 565.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 531.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 520.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

4390.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 4390.9
FF:10176-103C5 60 years, female 4390.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1454.3
Pig sample Sample description nTPM
Putamen
nTPM: 1454.3
Samples: 3

Max nTPM: 1967.2
Min nTPM: 1075.8
Sample B Female 1075.8
Sample C Male 1967.2
Sample D Male 1319.9

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