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BETA
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EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:435.4 nTPM
HPA Brain:1020.3 nTPM
GTEx:435.4 nTPM
FANTOM5:1467.0 Scaled Tags Per Million
Mouse:1215.2 nTPM
Rat:1389.1 nTPM
Pig:1012.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 1799349
Sample Intensity
Spinal cord_01
1889075
Spinal cord_02
1508197
Spinal cord_03
1533668
Spinal cord_04
2242774
Spinal cord_05
1245518
Spinal cord_06
1709623
Spinal cord_07
1906661
Spinal cord_08
3443479

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1020.3
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 708.6
2819 Male, age 47, both hemispheres 824.8
2193 Male, age 75, both hemispheres 723.9
2818 Female, age 79, both hemispheres 653.8
2734 Male, age 80, both hemispheres 631.8
Cervical spinal cord, central gray
nTPM: 1020.3
1981 Female, age 72, midline 1241.2
2565 Male, age 75, midline 1194.8
2194 Female, age 79, both hemispheres 1040.3
2816 Male, age 47, midline 818.6
2048 Male, age 55, midline 806.7
Cervical spinal cord, dorsal horn
nTPM: 789.6
2721 Male, age 90, both hemispheres 912.0
2173 Female, age 72, unknown 899.8
2069 Male, age 47, both hemispheres 810.5
2297 Male, age 75, both hemispheres 806.2
1877 Male, age 55, unknown 663.4
2296 Male, age 66, both hemispheres 646.0
Cervical spinal cord, ventral horn
nTPM: 939.5
2098 Female, age 72, unknown 1172.9
2295 Male, age 66, both hemispheres 1149.6
2809 Male, age 90, both hemispheres 908.0
2068 Male, age 55, unknown 869.7
2480 Male, age 75, both hemispheres 831.8
2820 Female, age 79, both hemispheres 705.1
Dorsal funiculus (white matter)
nTPM: 827.3
2812 Male, age 66, both hemispheres 1051.3
2817 Male, age 47, both hemispheres 827.5
2128 Male, age 75, both hemispheres 820.6
2064 Female, age 79, both hemispheres 776.8
2810 Male, age 90, both hemispheres 660.2
Lateral funiculus (white matter)
nTPM: 570.9
2094 Female, age 79, both hemispheres 632.6
2192 Male, age 75, both hemispheres 613.0
2099 Male, age 90, both hemispheres 610.5
2294 Male, age 66, both hemispheres 427.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

435.4
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 435.4
Samples: 204

Max nTPM: 981.2
Min nTPM: 186.6
Std nTPM: 140.7
Median nTPM: 414.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 981.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 955.9
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 907.5
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 818.6
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 802.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 799.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 795.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 739.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 720.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 695.1
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 690.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 685.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 677.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 677.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 649.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 648.0
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 632.1
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 613.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 613.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 612.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 612.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 609.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 604.9
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 603.6
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 596.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 594.4
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 589.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 588.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 581.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 566.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 565.4
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 563.7
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 559.6
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 557.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 556.7
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 556.5
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 548.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 539.0
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 537.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 537.3
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 534.4
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 528.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 528.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 527.7
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 522.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 521.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 517.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 517.4
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 517.2
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 510.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 506.7
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 505.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 502.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 499.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 498.0
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 497.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 497.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 495.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 494.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 492.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 487.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 484.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 481.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 479.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 477.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 476.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 475.5
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 475.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 471.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 468.5
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 464.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 464.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 461.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 459.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 458.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 453.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 452.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 451.8
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 451.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 444.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 442.9
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 441.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 441.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 434.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 434.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 432.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 432.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 432.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 432.3
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 432.0
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 428.1
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 424.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 424.6
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 424.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 422.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 422.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 420.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 420.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 418.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 418.0
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 417.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 414.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 413.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 413.5
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 410.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 410.4
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 409.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 408.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 408.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 405.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 404.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 403.9
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 399.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 397.5
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 392.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 392.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 391.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 390.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 389.9
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 388.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 388.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 387.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 385.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 383.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 381.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 381.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 381.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 379.9
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 376.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 376.1
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 374.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 369.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 367.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 365.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 362.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 361.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 360.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 359.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 358.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 358.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 358.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 357.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 357.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 354.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 353.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 352.3
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 339.2
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 338.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 338.1
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 337.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 336.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 336.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 335.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 334.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 332.6
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 332.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 331.7
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 330.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 330.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 329.7
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 328.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 328.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 326.9
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 322.9
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 322.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 321.5
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 316.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 316.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 316.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 315.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 312.6
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 305.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 305.5
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 305.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 303.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 301.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 295.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 293.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 292.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 289.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 287.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 287.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 283.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 283.6
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 282.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 274.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 270.4
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 269.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 266.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 253.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 253.3
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 252.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 247.9
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 241.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 241.2
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 240.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 231.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 231.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 226.6
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 215.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 209.8
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 206.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 201.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 186.6
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1467.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1467.0
FF:10181-103D1 60 years, female 1981.1
FF:10159-103A6 76 years, female 952.8

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1012.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 624.7
Samples: 4

Max nTPM: 767.1
Min nTPM: 491.2
Sample A Female 743.7
Sample B Female 496.8
Sample C Male 491.2
Sample D Male 767.1
Ventral spinal cord
nTPM: 1012.0
Samples: 4

Max nTPM: 1169.5
Min nTPM: 782.4
Sample A Female 1039.5
Sample B Female 1056.6
Sample C Male 1169.5
Sample D Male 782.4

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1215.2
Mouse sample Sample description nTPM
Spinal cord
nTPM: 1215.3
Samples: 4

Max nTPM: 1371.2
Min nTPM: 1112.0
Sample A 1112.0
Sample B 1180.5
Sample C 1197.3
Sample D 1371.2

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1389.1
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 1389.1
Samples: 4

Max nTPM: 1540.3
Min nTPM: 1297.8
Sample A 1540.3
Sample A 1346.9
Sample A 1371.6
Sample A 1297.8

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