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RPL27A
HPA
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  • RPL27A
TISSUE PRIMARY DATA AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Amygdala
Tissue methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1285.8 nTPM
HPA Brain:277.5 nTPM
GTEx:1285.8 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Mouse:220.5 nTPM
Allen mouse:11.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.5
Sample id Sample description nTPM
Amygdala
nTPM: 277.5
2695 Female, age 67, right hemisphere 372.7
2514 Male, age 75, right hemisphere 299.9
1987 Female, age 91, left hemisphere 247.9
2517 Female, age 94, left hemisphere 234.9
2814 Male, age 76, right hemisphere 232.3
Basal amygdala
nTPM: 237.3
2827 Female, age 67, right hemisphere 333.5
2609 Male, age 75, right hemisphere 282.0
2685 Female, age 94, left hemisphere 223.0
2110 Male, age 80, left hemisphere 214.2
1955 Male, age 76, both hemispheres 193.8
2243 Female, age 91, right hemisphere 177.5
Central amygdala
nTPM: 258.6
2826 Female, age 94, left hemisphere 440.4
2515 Male, age 75, right hemisphere 270.7
1905 Male, age 76, both hemispheres 200.7
2239 Male, age 80, left hemisphere 193.6
2701 Female, age 91, right hemisphere 187.5
Corticomedial amygdala
nTPM: 222.2
2428 Male, age 75, right hemisphere 249.8
2535 Female, age 67, right hemisphere 229.7
2240 Male, age 76, both hemispheres 227.5
2829 Male, age 80, left hemisphere 225.2
2429 Female, age 94, left hemisphere 200.7
2242 Female, age 91, right hemisphere 200.2
Lateral amygdala
nTPM: 266.9
2830 Female, age 67, right hemisphere 408.4
2516 Male, age 75, right hemisphere 314.6
2534 Female, age 94, left hemisphere 278.1
2256 Male, age 80, left hemisphere 213.9
1883 Male, age 76, both hemispheres 208.3
2255 Female, age 91, right hemisphere 178.3

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1285.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1285.8
Samples: 181

Max nTPM: 3811.4
Min nTPM: 500.2
Std nTPM: 501.8
Median nTPM: 1193.5
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 3811.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 3432.0
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 2936.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 2817.0
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2458.9
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 2456.5
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 2361.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2233.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 2226.4
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 2192.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 2167.8
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 2156.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 2053.3
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 2048.7
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 2044.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1959.3
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1951.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1942.9
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 1925.6
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 1917.9
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 1876.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1824.8
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1786.2
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 1776.9
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1752.0
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1702.5
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 1698.8
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 1695.1
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1686.0
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 1652.1
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 1636.8
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 1628.4
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1604.3
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 1602.8
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 1587.6
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 1568.3
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 1561.1
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1551.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1551.1
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1548.4
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 1545.8
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 1535.2
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 1527.4
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1523.8
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1518.3
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1514.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1488.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1481.1
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 1477.5
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 1471.9
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1460.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1454.3
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 1449.1
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 1439.1
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1418.4
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1412.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1403.4
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1397.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1376.6
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1374.5
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1372.2
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1367.6
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1361.9
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 1351.5
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1341.7
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 1335.7
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 1320.5
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1315.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1313.1
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1308.2
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1301.0
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1292.9
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 1290.2
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1287.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1284.1
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1282.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1273.8
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 1264.5
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1256.8
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1254.0
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 1248.5
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1244.2
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1239.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1230.9
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1228.7
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1226.3
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1214.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1214.2
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1207.3
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 1206.5
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 1193.5
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1188.0
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 1187.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1180.4
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 1175.4
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 1174.4
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 1162.4
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 1157.6
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1154.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1150.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1148.3
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1135.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1120.6
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 1118.1
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 1109.1
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 1108.3
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 1106.1
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1093.3
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1091.2
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1059.9
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1046.0
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1036.8
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1024.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1024.2
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1022.9
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1009.0
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1004.3
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 1004.3
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 997.6
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 996.7
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 996.3
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 995.8
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 989.4
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 986.6
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 983.1
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 979.7
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 975.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 972.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 964.0
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 960.0
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 956.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 955.2
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 951.8
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 950.3
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 949.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 945.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 940.6
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 940.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 938.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 931.4
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 927.0
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 919.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 918.4
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 909.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 907.7
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 892.4
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 891.5
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 889.2
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 887.5
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 884.1
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 879.3
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 875.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 860.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 856.2
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 854.0
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 839.9
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 837.1
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 831.6
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 829.4
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 826.5
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 814.1
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 811.9
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 801.4
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 793.3
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 783.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 773.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 757.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 745.0
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 743.8
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 731.3
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 714.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 711.0
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 709.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 692.7
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 677.4
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 665.8
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 665.7
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 652.9
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 567.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 563.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 500.2
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 46.0
FF:10151-102I7 76 years, female 46.0

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

220.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 220.5
Samples: 4

Max nTPM: 240.4
Min nTPM: 204.3
Sample A Male 204.3
Sample B Male 217.6
Sample C Female 240.4
Sample D Female 219.5

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 11.0
69262228 Antisense, RP_050301_01_F08, Mouse strain C57BL/6J (56 days, male) 11.0

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