HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:122.9 nTPM
HPA Brain:71.1 nTPM
GTEx:122.9 nTPM
FANTOM5:228.1 Scaled Tags Per Million
Pig:76.9 nTPM
Mouse:116.6 nTPM
Allen mouse:7.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026816
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 71.1
Sample id Sample description nTPM
Hippocampus
nTPM: 68.9
1898 Male, age 80, left hemisphere 89.4
1855 Male, age 76, left hemisphere 81.7
1911 Female, age 85, right hemisphere 66.1
2529 Female, age 94, left hemisphere 63.4
2148 Female, age 91, left hemisphere 56.9
2621 Female, age 67, right hemisphere 55.8
Dentate gyrus
nTPM: 64.4
2010 Male, age 76, both hemispheres 88.6
2246 Female, age 85, both hemispheres 67.8
2528 Male, age 74, both hemispheres 65.2
2530 Female, age 94, left hemisphere 59.6
1927 Female, age 91, both hemispheres 57.0
2531 Female, age 67, both hemispheres 48.5
Entorhinal gyrus
nTPM: 44.0
2117 Female, age 91, right hemisphere 65.5
1938 Female, age 85, left hemisphere 52.1
1787 Male, age 76, left hemisphere 45.8
2764 Male, age 80, right hemisphere 43.9
2686 Male, age 75, right hemisphere 33.4
2613 Female, age 94, left hemisphere 23.3
Hippocampus, CA1
nTPM: 71.1
1873 Female, age 85, both hemispheres 85.4
2749 Male, age 80, left hemisphere 75.9
2045 Male, age 76, both hemispheres 72.4
2527 Male, age 74, both hemispheres 64.3
2082 Female, age 91, right hemisphere 57.3
Hippocampus, CA2
nTPM: 63.2
2249 Male, age 74, both hemispheres 79.7
1892 Male, age 76, both hemispheres 70.4
1963 Male, age 80, left hemisphere 64.2
2113 Female, age 91, right hemisphere 60.8
1940 Female, age 85, left hemisphere 54.3
2437 Female, age 94, left hemisphere 49.8
Hippocampus, CA3
nTPM: 57.3
1891 Female, age 85, both hemispheres 68.0
1867 Male, age 76, both hemispheres 66.0
2436 Male, age 74, both hemispheres 62.7
2137 Male, age 80, left hemisphere 61.4
2620 Female, age 94, left hemisphere 49.7
2861 Female, age 67, both hemispheres 36.2
Parahippocampal cortex
nTPM: 50.7
2018 Male, age 76, both hemispheres 73.2
2250 Female, age 67, right hemisphere 61.1
1933 Female, age 85, both hemispheres 59.5
2245 Female, age 91, both hemispheres 56.9
1850 Male, age 80, both hemispheres 51.4
1990 Female, age 91, right hemisphere 50.5
2532 Female, age 72, left hemisphere 44.9
2692 Male, age 74, both hemispheres 39.4
2693 Female, age 94, both hemispheres 38.1
2622 Female, age 67, right hemisphere 32.4
Perirhinal gyrus
nTPM: 48.8
1847 Female, age 91, left hemisphere 57.9
1841 Female, age 85, right hemisphere 49.9
2521 Female, age 94, right hemisphere 47.8
1794 Male, age 80, right hemisphere 47.3
2848 Male, age 76, right hemisphere 41.2
Subiculum
nTPM: 61.1
1901 Male, age 80, both hemispheres 73.0
2042 Male, age 76, both hemispheres 70.5
2729 Female, age 91, right hemisphere 60.3
2619 Male, age 74, both hemispheres 58.3
1977 Female, age 85, both hemispheres 57.3
2438 Female, age 94, left hemisphere 47.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 122.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 122.9
Samples: 255

Max nTPM: 252.9
Min nTPM: 58.3
Std nTPM: 27.7
Median nTPM: 121.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 252.9
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 211.6
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 192.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 191.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 189.3
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 186.8
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 181.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 181.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 181.1
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 175.8
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 173.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 228.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 228.1
FF:10169-103B7 60 years, female 268.9
FF:10153-102I9 76 years, female 187.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 76.9
Pig sample Sample description nTPM
Subiculum
nTPM: 59.8
Samples: 4

Max nTPM: 71.5
Min nTPM: 55.6
Sample A Female 71.5
Sample B Female 55.6
Sample C Male 55.6
Sample D Male 56.5
Dorsal hippocampus
nTPM: 76.5
Samples: 4

Max nTPM: 97.3
Min nTPM: 55.8
Sample A Female 97.3
Sample B Female 69.8
Sample C Male 82.9
Sample D Male 55.8
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 68.5
Min nTPM: 51.5
Sample A Female 55.1
Sample B Female 68.5
Sample C Male 61.1
Sample D Male 51.5
Ventral hippocampus
nTPM: 76.9
Samples: 4

Max nTPM: 97.9
Min nTPM: 58.3
Sample A Female 97.9
Sample B Female 58.3
Sample C Male 81.7
Sample D Male 69.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 116.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.2
Samples: 4

Max nTPM: 98.0
Min nTPM: 76.4
Sample A Male 98.0
Sample B Male 95.1
Sample C Female 83.2
Sample D Female 76.4
Hippocampal formation
nTPM: 116.6
Samples: 4

Max nTPM: 124.0
Min nTPM: 105.0
Sample A Male 124.0
Sample B Male 119.3
Sample C Female 105.0
Sample D Female 118.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
385777 Antisense, RP_040625_01_E05, Mouse strain C57BL/6J (56 days, male) 7.2

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