We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CIAO2B
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CIAO2B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:129.5 nTPM
HPA Brain:89.9 nTPM
GTEx:129.5 nTPM
Pig:59.4 nTPM
Mouse:15.6 nTPM
Allen mouse:1.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 79.6
2226 Male, age 75, left hemisphere 84.2
1961 Female, age 42, unknown 75.0
Dorsomedial nucleus
nTPM: 69.4
2041 Female, age 72, unknown 77.0
1989 Male, age 62, unknown 69.9
2017 Female, age 42, unknown 61.3
Lateral hypothalamic area
nTPM: 84.0
1791 Male, age 80, right hemisphere 100.0
2271 Male, age 75, both hemispheres 86.6
2228 Male, age 66, unknown 83.8
2412 Male, age 62, unknown 65.6
Mammillary body
nTPM: 89.9
1923 Female, age 72, unknown 108.7
1948 Female, age 72, unknown 89.9
1834 Female, age 42, unknown 85.4
1945 Male, age 80, right hemisphere 83.8
2413 Male, age 66, unknown 81.6
Paraventricular nucleus
nTPM: 67.3
2700 Male, age 62, unknown 67.3
Preoptic area
nTPM: 72.2
2414 Female, age 72, unknown 76.3
1861 Female, age 42, unknown 72.9
1907 Male, age 80, right hemisphere 67.3
Supraoptic nucleus
nTPM: 85.7
2043 Male, age 62, unknown 92.3
1894 Female, age 72, unknown 89.2
2835 Female, age 72, unknown 75.6
Ventromedial nucleus
nTPM: 67.8
1982 Female, age 72, unknown 79.3
1822 Female, age 42, unknown 56.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 129.5
Samples: 257

Max nTPM: 254.1
Min nTPM: 53.7
Std nTPM: 28.8
Median nTPM: 125.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 254.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 243.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 227.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 221.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 213.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 206.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 196.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 194.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 191.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 189.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 189.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 185.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 181.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 180.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 174.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 173.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 173.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 171.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 170.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 170.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 168.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 168.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 168.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 165.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 164.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 164.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 164.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 163.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 162.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 161.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 160.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 160.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 159.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 158.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 158.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 157.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 156.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 156.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 156.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 156.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 156.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 156.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 154.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 153.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 153.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 152.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 152.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 151.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 150.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 150.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 150.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 149.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 149.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 149.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 149.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 148.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 147.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 147.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 147.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 147.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 146.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 145.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 145.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 145.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 144.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 144.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 144.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 144.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 144.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 143.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 142.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 141.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 141.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 141.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 139.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 139.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 138.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 138.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 138.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 138.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 138.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 137.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 137.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 137.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 137.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 136.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 136.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 136.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 136.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 136.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 136.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 136.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 135.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 135.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 135.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 134.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 134.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 133.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 133.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 133.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 133.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 132.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 132.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 132.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 131.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 131.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 131.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 131.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 130.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 130.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 130.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 129.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 129.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 129.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 129.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 128.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 128.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 128.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 128.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 127.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 127.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 127.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 127.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 126.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 126.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 125.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 125.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 125.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 125.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 124.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 124.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 123.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 123.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 123.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 122.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 122.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 122.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 121.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 121.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 121.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 121.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 121.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 120.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 120.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 120.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 120.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 120.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 120.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 120.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 120.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 120.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 120.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 119.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 119.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 119.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 119.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 119.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 118.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 118.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 118.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 117.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 117.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 117.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 117.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 117.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 117.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 116.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 116.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 116.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 116.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 115.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 115.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 114.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 114.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 114.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 114.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 114.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 114.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 114.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 113.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 113.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 113.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 113.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 113.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 113.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 113.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 113.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 113.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 112.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 112.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 112.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 112.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 111.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 111.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 111.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 111.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 110.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 110.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 110.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 109.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 109.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 109.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 108.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 108.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 108.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 107.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 106.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 106.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 106.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 105.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 105.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 105.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 105.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 104.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 104.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 104.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 104.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 104.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 104.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 103.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 103.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 103.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 102.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 102.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 102.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 100.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 100.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 100.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 100.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 100.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 99.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 99.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 99.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 98.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 96.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 96.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 96.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 94.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 94.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 93.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 93.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 93.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 92.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 92.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 90.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 90.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 88.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 85.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 84.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 84.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 83.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 83.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 80.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 80.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 68.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 62.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 53.7
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 59.4
Samples: 4

Max nTPM: 77.6
Min nTPM: 43.5
Sample A Female 77.6
Sample B Female 61.7
Sample C Male 54.9
Sample D Male 43.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 15.7
Samples: 4

Max nTPM: 17.4
Min nTPM: 14.9
Sample A Male 17.4
Sample B Male 15.1
Sample C Female 15.2
Sample D Female 14.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.4
69838600 Antisense, RP_050310_02_B08, Mouse strain C57BL/6J (56 days, male) 2.8
74819685 Antisense, RP_060315_02_H01, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo