HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:112.6 nTPM
HPA Brain:189.6 nTPM
GTEx:112.6 nTPM
FANTOM5:172.7 Scaled Tags Per Million
Pig:835.0 nTPM
Mouse:87.0 nTPM
Allen mouse:6.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 189.6
Sample id Sample description nTPM
Hippocampus
nTPM: 147.3
1855 Male, age 76, left hemisphere 164.7
1898 Male, age 80, left hemisphere 163.2
2148 Female, age 91, left hemisphere 151.3
2621 Female, age 67, right hemisphere 149.4
2529 Female, age 94, left hemisphere 135.4
1911 Female, age 85, right hemisphere 119.6
Dentate gyrus
nTPM: 161.2
2246 Female, age 85, both hemispheres 177.9
1927 Female, age 91, both hemispheres 177.5
2531 Female, age 67, both hemispheres 169.6
2010 Male, age 76, both hemispheres 156.8
2530 Female, age 94, left hemisphere 144.3
2528 Male, age 74, both hemispheres 141.0
Entorhinal gyrus
nTPM: 163.6
2613 Female, age 94, left hemisphere 197.3
2764 Male, age 80, right hemisphere 176.1
1938 Female, age 85, left hemisphere 169.1
1787 Male, age 76, left hemisphere 157.9
2686 Male, age 75, right hemisphere 154.9
2117 Female, age 91, right hemisphere 126.1
Hippocampus, CA1
nTPM: 186.4
2749 Male, age 80, left hemisphere 248.2
2082 Female, age 91, right hemisphere 200.2
2045 Male, age 76, both hemispheres 194.7
1873 Female, age 85, both hemispheres 152.9
2527 Male, age 74, both hemispheres 136.0
Hippocampus, CA2
nTPM: 148.7
1892 Male, age 76, both hemispheres 182.5
1963 Male, age 80, left hemisphere 159.9
2113 Female, age 91, right hemisphere 155.1
2437 Female, age 94, left hemisphere 134.9
2249 Male, age 74, both hemispheres 134.3
1940 Female, age 85, left hemisphere 125.3
Hippocampus, CA3
nTPM: 185.4
2137 Male, age 80, left hemisphere 238.1
2620 Female, age 94, left hemisphere 205.8
2861 Female, age 67, both hemispheres 187.3
2436 Male, age 74, both hemispheres 184.1
1867 Male, age 76, both hemispheres 176.4
1891 Female, age 85, both hemispheres 120.9
Parahippocampal cortex
nTPM: 157.0
2693 Female, age 94, both hemispheres 173.8
1850 Male, age 80, both hemispheres 172.3
2245 Female, age 91, both hemispheres 165.5
1933 Female, age 85, both hemispheres 158.8
1990 Female, age 91, right hemisphere 155.1
2018 Male, age 76, both hemispheres 154.1
2622 Female, age 67, right hemisphere 152.0
2532 Female, age 72, left hemisphere 150.6
2250 Female, age 67, right hemisphere 149.4
2692 Male, age 74, both hemispheres 138.3
Perirhinal gyrus
nTPM: 189.6
1847 Female, age 91, left hemisphere 217.2
2848 Male, age 76, right hemisphere 193.9
1794 Male, age 80, right hemisphere 192.9
2521 Female, age 94, right hemisphere 176.7
1841 Female, age 85, right hemisphere 167.3
Subiculum
nTPM: 142.6
1977 Female, age 85, both hemispheres 172.6
1901 Male, age 80, both hemispheres 150.9
2729 Female, age 91, right hemisphere 141.0
2042 Male, age 76, both hemispheres 132.9
2619 Male, age 74, both hemispheres 131.7
2438 Female, age 94, left hemisphere 126.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 112.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.6
Samples: 255

Max nTPM: 295.0
Min nTPM: 44.2
Std nTPM: 38.8
Median nTPM: 110.1
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 295.0
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 229.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 223.3
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 208.0
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 201.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 200.2
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 197.0
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 194.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 191.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 183.8
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 181.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 172.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 172.7
FF:10169-103B7 60 years, female 217.0
FF:10153-102I9 76 years, female 128.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 835.0
Pig sample Sample description nTPM
Subiculum
nTPM: 752.3
Samples: 4

Max nTPM: 940.5
Min nTPM: 589.4
Sample A Female 940.5
Sample B Female 589.4
Sample C Male 852.6
Sample D Male 626.5
Dorsal hippocampus
nTPM: 702.4
Samples: 4

Max nTPM: 862.0
Min nTPM: 528.3
Sample A Female 862.0
Sample B Female 704.8
Sample C Male 714.3
Sample D Male 528.3
Entorhinal cortex
nTPM: 587.8
Samples: 4

Max nTPM: 736.7
Min nTPM: 485.5
Sample A Female 736.7
Sample B Female 485.5
Sample C Male 625.7
Sample D Male 503.1
Ventral hippocampus
nTPM: 835.0
Samples: 4

Max nTPM: 1129.0
Min nTPM: 529.3
Sample A Female 1014.9
Sample B Female 529.3
Sample C Male 1129.0
Sample D Male 666.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 87.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.0
Samples: 4

Max nTPM: 98.0
Min nTPM: 77.4
Sample A Male 77.4
Sample B Male 79.5
Sample C Female 93.1
Sample D Female 98.0
Hippocampal formation
nTPM: 85.8
Samples: 4

Max nTPM: 93.5
Min nTPM: 78.8
Sample A Male 93.5
Sample B Male 88.7
Sample C Female 78.8
Sample D Female 82.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
68637575 Antisense, RP_050126_01_B08, Mouse strain C57BL/6J (56 days, male) 6.3
71016617 Antisense, RP_050725_03_A07, Mouse strain C57BL/6J (56 days, male) 6.0

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