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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:183.0 nTPM
HPA Brain:297.0 nTPM
GTEx:183.0 nTPM
Pig:932.5 nTPM
Mouse:175.0 nTPM
Allen mouse:7.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

297.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 226.6
1961 Female, age 42, unknown 249.4
2226 Male, age 75, left hemisphere 203.7
Dorsomedial nucleus
nTPM: 194.8
2041 Female, age 72, unknown 238.1
2017 Female, age 42, unknown 201.3
1989 Male, age 62, unknown 144.9
Lateral hypothalamic area
nTPM: 192.6
2228 Male, age 66, unknown 216.0
1791 Male, age 80, right hemisphere 197.5
2412 Male, age 62, unknown 191.7
2271 Male, age 75, both hemispheres 165.2
Mammillary body
nTPM: 125.3
1923 Female, age 72, unknown 145.2
1948 Female, age 72, unknown 125.1
1945 Male, age 80, right hemisphere 123.0
2413 Male, age 66, unknown 118.2
1834 Female, age 42, unknown 115.0
Paraventricular nucleus
nTPM: 202.4
2700 Male, age 62, unknown 202.4
Preoptic area
nTPM: 204.6
1907 Male, age 80, right hemisphere 275.2
1861 Female, age 42, unknown 195.6
2414 Female, age 72, unknown 143.1
Supraoptic nucleus
nTPM: 148.7
2835 Female, age 72, unknown 175.2
1894 Female, age 72, unknown 142.9
2043 Male, age 62, unknown 128.0
Ventromedial nucleus
nTPM: 297.0
1982 Female, age 72, unknown 319.3
1822 Female, age 42, unknown 274.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

183.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 183.0
Samples: 257

Max nTPM: 450.7
Min nTPM: 55.6
Std nTPM: 62.1
Median nTPM: 183.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 450.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 435.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 344.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 321.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 300.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 296.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 296.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 293.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 292.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 286.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 277.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 276.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 272.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 271.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 271.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 270.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 268.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 267.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 266.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 265.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 265.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 263.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 261.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 259.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 258.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 257.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 256.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 256.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 256.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 255.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 254.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 254.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 253.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 252.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 252.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 250.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 250.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 247.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 246.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 244.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 243.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 243.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 240.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 237.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 235.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 234.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 233.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 233.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 232.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 232.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 232.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 232.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 231.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 231.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 231.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 229.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 229.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 229.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 225.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 224.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 224.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 224.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 223.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 223.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 223.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 223.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 222.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 222.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 222.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 222.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 221.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 221.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 220.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 219.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 218.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 218.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 218.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 217.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 217.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 216.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 216.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 214.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 214.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 213.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 213.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 213.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 213.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 212.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 212.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 211.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 211.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 210.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 210.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 208.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 207.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 205.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 205.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 205.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 205.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 204.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 202.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 201.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 200.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 197.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 197.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 197.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 196.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 195.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 195.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 194.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 193.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 192.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 192.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 191.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 191.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 191.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 191.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 191.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 190.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 189.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 187.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 187.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 186.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 186.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 186.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 185.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 184.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 184.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 183.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 183.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 182.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 180.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 180.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 179.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 179.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 178.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 178.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 177.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 176.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 175.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 174.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 174.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 174.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 174.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 171.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 171.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 170.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 170.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 169.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 169.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 169.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 169.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 168.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 168.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 167.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 166.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 164.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 162.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 161.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 161.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 159.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 159.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 158.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 157.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 156.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 154.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 154.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 153.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 153.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 153.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 153.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 152.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 151.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 150.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 149.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 148.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 147.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 147.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 147.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 146.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 146.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 144.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 143.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 142.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 142.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 142.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 141.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 141.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 141.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 140.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 139.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 139.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 138.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 138.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 137.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 137.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 137.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 136.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 136.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 135.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 134.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 134.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 133.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 133.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 132.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 131.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 131.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 130.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 129.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 128.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 125.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 124.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 124.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 121.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 121.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 120.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 119.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 115.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 115.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 115.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 113.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 113.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 112.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 109.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 108.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 106.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 106.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 105.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 104.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 102.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 102.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 100.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 98.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 97.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 97.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 95.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 95.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 95.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 94.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 93.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 92.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 88.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 88.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 87.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 87.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 84.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 75.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 73.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 70.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 70.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 69.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 69.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 67.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 65.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 60.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 57.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 55.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

932.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 932.5
Samples: 4

Max nTPM: 1146.8
Min nTPM: 816.8
Sample A Female 1146.8
Sample B Female 816.8
Sample C Male 869.4
Sample D Male 897.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 175.0
Samples: 4

Max nTPM: 187.6
Min nTPM: 162.2
Sample A Male 170.8
Sample B Male 187.6
Sample C Female 179.3
Sample D Female 162.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.6
68637575 Antisense, RP_050126_01_B08, Mouse strain C57BL/6J (56 days, male) 8.3
71016617 Antisense, RP_050725_03_A07, Mouse strain C57BL/6J (56 days, male) 6.8

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