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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • BLCAP
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:206.7 nTPM
GTEx:155.0 nTPM
FANTOM5:591.1 Scaled Tags Per Million
Macaque:81.3 nTPM
Pig:898.3 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

206.7
Sample id Sample description nTPM
Putamen
nTPM: 206.7
1838 Male, age 80, right hemisphere 314.0
1937 Female, age 91, right hemisphere 265.9
2466 Female, age 79, unknown 206.2
2647 Male, age 75, left hemisphere 189.3
1829 Male, age 74, unknown 180.7
2482 Female, age 94, left hemisphere 158.3
2489 Female, age 72, unknown 132.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

155.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 155.0
Samples: 254

Max nTPM: 405.2
Min nTPM: 50.4
Std nTPM: 69.5
Median nTPM: 138.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 405.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 380.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 373.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 370.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 325.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 325.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 320.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 311.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 302.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 297.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 291.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 291.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 289.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 286.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 286.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 283.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 282.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 282.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 281.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 280.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 280.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 277.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 268.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 267.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 266.4
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 263.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 258.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 246.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 246.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 246.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 237.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 234.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 231.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 231.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 229.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 228.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 228.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 226.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 223.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 223.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 222.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 222.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 220.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 215.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 215.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 211.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 209.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 208.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 208.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 208.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 208.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 207.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 206.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 205.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 205.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 204.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 203.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 199.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 197.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 197.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 197.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 196.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 194.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 191.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 191.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 190.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 188.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 187.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 187.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 186.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 186.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 185.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 185.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 185.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 184.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 184.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 183.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 183.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 182.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 182.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 181.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 180.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 180.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 180.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 179.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 178.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 176.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 175.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 174.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 172.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 171.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 171.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 170.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 170.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 170.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 168.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 167.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 165.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 165.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 164.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 164.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 164.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 163.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 161.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 161.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 160.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 160.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 158.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 157.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 157.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 155.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 155.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 155.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 154.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 152.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 151.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 150.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 150.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 150.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 146.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 145.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 144.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 142.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 141.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 141.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 138.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 138.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 138.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 137.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 136.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 135.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 133.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 132.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 132.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 131.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 129.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 129.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 129.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 129.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 128.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 128.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 127.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 125.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 125.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 125.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 125.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 124.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 124.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 124.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 121.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 120.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 120.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 118.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 117.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 117.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 116.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 115.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 114.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 114.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 113.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 113.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 112.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 112.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 111.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 111.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 111.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 110.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 109.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 109.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 109.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 109.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 108.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 107.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 107.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 105.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 104.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 104.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 104.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 102.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 101.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 100.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 100.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 99.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 99.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 98.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 98.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 98.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 97.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 97.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 97.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 96.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 96.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 96.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 96.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 95.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 94.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 94.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 93.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 93.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 93.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 92.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 92.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 92.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 92.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 92.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 92.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 92.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 91.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 91.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 91.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 90.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 90.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 90.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 90.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 89.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 87.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 87.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 86.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 86.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 86.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 86.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 86.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 85.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 84.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 84.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 84.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 83.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 82.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 82.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 82.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 81.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 80.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 80.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 80.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 79.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 78.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 78.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 78.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 77.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 76.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 76.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 75.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 74.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 74.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 73.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 70.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 70.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 68.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 68.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 68.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 65.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 64.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 63.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 50.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

591.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 591.1
FF:10176-103C5 60 years, female 591.1

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.3
Macaque sample Sample description nTPM
Putamen
nTPM: 81.3
Samples: 2

Max nTPM: 86.8
Min nTPM: 75.7
Sample A 75.7
Sample B 86.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

898.3
Pig sample Sample description nTPM
Putamen
nTPM: 898.3
Samples: 3

Max nTPM: 985.0
Min nTPM: 755.7
Sample B Female 755.7
Sample C Male 954.2
Sample D Male 985.0

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