HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:172.7 nTPM
HPA Brain:84.3 nTPM
GTEx:172.7 nTPM
FANTOM5:169.0 Scaled Tags Per Million
Pig:102.7 nTPM
Mouse:231.4 nTPM
Allen mouse:16.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012720Antibody CAB011487
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 84.3
Sample id Sample description nTPM
Hippocampus
nTPM: 84.3
1898 Male, age 80, left hemisphere 106.6
2529 Female, age 94, left hemisphere 87.5
2148 Female, age 91, left hemisphere 80.9
2621 Female, age 67, right hemisphere 78.6
1911 Female, age 85, right hemisphere 76.2
1855 Male, age 76, left hemisphere 75.7
Dentate gyrus
nTPM: 76.2
2010 Male, age 76, both hemispheres 86.8
2530 Female, age 94, left hemisphere 86.5
2528 Male, age 74, both hemispheres 79.4
2246 Female, age 85, both hemispheres 77.4
1927 Female, age 91, both hemispheres 70.2
2531 Female, age 67, both hemispheres 57.2
Entorhinal gyrus
nTPM: 68.8
2117 Female, age 91, right hemisphere 94.4
1938 Female, age 85, left hemisphere 87.5
1787 Male, age 76, left hemisphere 73.5
2764 Male, age 80, right hemisphere 71.9
2686 Male, age 75, right hemisphere 44.9
2613 Female, age 94, left hemisphere 40.8
Hippocampus, CA1
nTPM: 78.3
1873 Female, age 85, both hemispheres 90.7
2527 Male, age 74, both hemispheres 81.4
2749 Male, age 80, left hemisphere 77.1
2082 Female, age 91, right hemisphere 73.9
2045 Male, age 76, both hemispheres 68.6
Hippocampus, CA2
nTPM: 84.3
2249 Male, age 74, both hemispheres 115.6
1940 Female, age 85, left hemisphere 88.0
1892 Male, age 76, both hemispheres 84.8
1963 Male, age 80, left hemisphere 81.7
2113 Female, age 91, right hemisphere 70.7
2437 Female, age 94, left hemisphere 64.8
Hippocampus, CA3
nTPM: 74.1
2436 Male, age 74, both hemispheres 116.5
1891 Female, age 85, both hemispheres 83.7
1867 Male, age 76, both hemispheres 79.3
2137 Male, age 80, left hemisphere 62.5
2861 Female, age 67, both hemispheres 51.6
2620 Female, age 94, left hemisphere 51.0
Parahippocampal cortex
nTPM: 67.5
2250 Female, age 67, right hemisphere 84.9
1933 Female, age 85, both hemispheres 84.1
1990 Female, age 91, right hemisphere 76.0
2018 Male, age 76, both hemispheres 74.4
2245 Female, age 91, both hemispheres 72.0
1850 Male, age 80, both hemispheres 68.2
2532 Female, age 72, left hemisphere 66.9
2692 Male, age 74, both hemispheres 61.7
2693 Female, age 94, both hemispheres 46.9
2622 Female, age 67, right hemisphere 40.3
Perirhinal gyrus
nTPM: 69.7
1847 Female, age 91, left hemisphere 79.4
1841 Female, age 85, right hemisphere 74.8
2521 Female, age 94, right hemisphere 69.6
1794 Male, age 80, right hemisphere 67.8
2848 Male, age 76, right hemisphere 57.0
Subiculum
nTPM: 80.2
2042 Male, age 76, both hemispheres 90.8
1977 Female, age 85, both hemispheres 86.9
1901 Male, age 80, both hemispheres 85.7
2619 Male, age 74, both hemispheres 75.7
2438 Female, age 94, left hemisphere 72.5
2729 Female, age 91, right hemisphere 69.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 172.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 172.7
Samples: 255

Max nTPM: 357.4
Min nTPM: 89.9
Std nTPM: 39.6
Median nTPM: 167.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 357.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 339.6
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 337.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 313.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 285.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 285.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 278.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 271.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 253.6
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 252.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 250.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 169.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.0
FF:10153-102I9 76 years, female 203.0
FF:10169-103B7 60 years, female 135.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 102.7
Pig sample Sample description nTPM
Subiculum
nTPM: 78.5
Samples: 4

Max nTPM: 101.4
Min nTPM: 68.5
Sample A Female 101.4
Sample B Female 73.9
Sample C Male 70.0
Sample D Male 68.5
Dorsal hippocampus
nTPM: 102.6
Samples: 4

Max nTPM: 138.9
Min nTPM: 79.7
Sample A Female 138.9
Sample B Female 94.4
Sample C Male 97.5
Sample D Male 79.7
Entorhinal cortex
nTPM: 75.3
Samples: 4

Max nTPM: 85.1
Min nTPM: 58.3
Sample A Female 85.1
Sample B Female 80.5
Sample C Male 77.3
Sample D Male 58.3
Ventral hippocampus
nTPM: 91.8
Samples: 4

Max nTPM: 109.5
Min nTPM: 64.3
Sample A Female 103.5
Sample B Female 64.3
Sample C Male 109.5
Sample D Male 90.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 231.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 194.1
Samples: 4

Max nTPM: 210.5
Min nTPM: 184.3
Sample A Male 184.3
Sample B Male 194.6
Sample C Female 210.5
Sample D Female 186.9
Hippocampal formation
nTPM: 231.4
Samples: 4

Max nTPM: 242.3
Min nTPM: 219.9
Sample A Male 234.9
Sample B Male 219.9
Sample C Female 228.5
Sample D Female 242.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.8
74580984 Antisense, RP_060215_02_C08, Mouse strain C57BL/6J (56 days, male) 16.8

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