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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:193.0 nTPM
HPA Brain:144.7 nTPM
GTEx:193.0 nTPM
Pig:121.3 nTPM
Mouse:153.8 nTPM
Allen mouse:8.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

144.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 95.7
2226 Male, age 75, left hemisphere 114.4
1961 Female, age 42, unknown 77.0
Dorsomedial nucleus
nTPM: 85.4
2041 Female, age 72, unknown 92.9
1989 Male, age 62, unknown 88.4
2017 Female, age 42, unknown 74.9
Lateral hypothalamic area
nTPM: 123.2
1791 Male, age 80, right hemisphere 136.1
2228 Male, age 66, unknown 135.7
2271 Male, age 75, both hemispheres 135.3
2412 Male, age 62, unknown 85.8
Mammillary body
nTPM: 107.4
1923 Female, age 72, unknown 119.7
2413 Male, age 66, unknown 115.0
1945 Male, age 80, right hemisphere 114.8
1948 Female, age 72, unknown 94.5
1834 Female, age 42, unknown 93.0
Paraventricular nucleus
nTPM: 94.7
2700 Male, age 62, unknown 94.7
Preoptic area
nTPM: 92.9
1907 Male, age 80, right hemisphere 103.4
2414 Female, age 72, unknown 89.5
1861 Female, age 42, unknown 85.8
Supraoptic nucleus
nTPM: 144.7
2043 Male, age 62, unknown 155.8
1894 Female, age 72, unknown 152.4
2835 Female, age 72, unknown 125.9
Ventromedial nucleus
nTPM: 88.3
1982 Female, age 72, unknown 89.8
1822 Female, age 42, unknown 86.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 193.0
Samples: 257

Max nTPM: 598.1
Min nTPM: 92.7
Std nTPM: 54.7
Median nTPM: 182.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 598.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 415.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 389.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 383.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 366.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 361.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 328.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 318.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 311.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 310.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 306.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 306.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 301.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 292.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 288.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 287.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 284.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 275.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 264.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 262.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 261.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 260.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 258.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 250.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 249.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 247.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 245.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 242.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 242.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 240.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 239.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 233.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 233.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 233.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 232.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 231.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 231.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 230.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 228.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 226.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 225.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 225.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 225.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 224.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 224.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 224.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 223.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 222.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 222.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 222.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 219.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 219.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 219.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 218.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 217.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 217.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 216.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 216.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 214.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 212.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 212.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 211.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 211.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 210.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 210.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 209.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 209.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 207.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 206.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 206.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 206.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 204.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 203.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 203.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 202.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 202.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 202.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 202.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 201.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 201.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 201.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 201.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 200.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 198.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 198.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 198.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 198.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 197.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 197.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 197.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 196.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 195.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 195.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 194.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 194.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 194.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 192.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 191.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 191.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 191.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 191.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 190.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 190.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 190.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 190.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 190.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 189.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 189.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 189.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 189.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 188.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 188.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 187.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 187.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 187.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 186.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 186.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 186.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 186.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 186.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 185.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 184.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 183.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 183.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 183.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 183.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 183.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 182.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 182.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 182.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 182.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 182.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 181.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 181.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 181.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 181.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 181.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 180.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 180.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 180.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 180.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 179.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 179.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 179.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 178.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 178.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 177.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 177.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 177.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 176.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 176.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 176.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 176.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 176.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 176.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 175.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 175.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 174.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 174.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 174.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 173.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 173.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 173.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 173.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 172.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 172.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 172.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 171.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 171.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 171.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 171.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 171.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 169.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 169.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 169.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 169.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 168.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 168.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 167.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 166.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 166.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 166.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 166.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 165.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 165.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 164.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 164.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 164.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 164.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 162.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 162.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 162.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 161.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 161.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 161.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 161.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 161.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 160.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 159.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 158.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 158.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 158.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 157.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 157.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 157.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 156.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 156.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 156.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 156.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 155.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 155.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 153.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 152.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 151.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 150.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 150.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 150.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 149.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 149.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 148.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 147.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 146.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 145.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 145.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 144.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 144.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 144.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 143.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 143.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 142.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 141.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 141.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 140.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 140.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 140.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 139.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 138.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 138.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 137.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 136.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 134.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 134.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 134.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 133.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 132.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 132.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 129.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 129.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 125.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 125.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 121.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 119.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 116.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 115.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 114.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 98.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 92.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

121.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 121.3
Samples: 4

Max nTPM: 145.3
Min nTPM: 93.1
Sample A Female 145.3
Sample B Female 116.2
Sample C Male 130.4
Sample D Male 93.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 153.8
Samples: 4

Max nTPM: 162.1
Min nTPM: 140.3
Sample A Male 140.3
Sample B Male 162.1
Sample C Female 152.1
Sample D Female 160.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.6
74580984 Antisense, RP_060215_02_C08, Mouse strain C57BL/6J (56 days, male) 8.6

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