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  • SUMMARY

  • TISSUE

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  • MAP1A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:73.7 nTPM
HPA Brain:387.7 nTPM
GTEx:73.7 nTPM
Pig:244.6 nTPM
Mouse:183.1 nTPM
Allen mouse:11.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

387.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 278.1
2226 Male, age 75, left hemisphere 319.7
1961 Female, age 42, unknown 236.4
Dorsomedial nucleus
nTPM: 297.2
1989 Male, age 62, unknown 463.8
2017 Female, age 42, unknown 234.7
2041 Female, age 72, unknown 193.0
Lateral hypothalamic area
nTPM: 370.7
2271 Male, age 75, both hemispheres 495.1
1791 Male, age 80, right hemisphere 347.7
2228 Male, age 66, unknown 347.6
2412 Male, age 62, unknown 292.3
Mammillary body
nTPM: 387.7
1923 Female, age 72, unknown 516.1
2413 Male, age 66, unknown 421.7
1834 Female, age 42, unknown 363.0
1948 Female, age 72, unknown 347.8
1945 Male, age 80, right hemisphere 289.6
Paraventricular nucleus
nTPM: 251.1
2700 Male, age 62, unknown 251.1
Preoptic area
nTPM: 273.5
1861 Female, age 42, unknown 283.7
2414 Female, age 72, unknown 276.2
1907 Male, age 80, right hemisphere 260.6
Supraoptic nucleus
nTPM: 250.4
2835 Female, age 72, unknown 332.1
2043 Male, age 62, unknown 210.2
1894 Female, age 72, unknown 209.0
Ventromedial nucleus
nTPM: 253.5
1982 Female, age 72, unknown 262.9
1822 Female, age 42, unknown 244.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 73.7
Samples: 257

Max nTPM: 220.8
Min nTPM: 28.7
Std nTPM: 25.2
Median nTPM: 70.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 220.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 156.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 154.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 154.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 150.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 143.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 136.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 134.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 133.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 125.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 122.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 122.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 122.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 120.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 119.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 112.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 111.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 111.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 110.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 110.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 110.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 110.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 109.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 109.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 107.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 105.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 105.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 103.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 103.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 102.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 102.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 102.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 101.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 101.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 100.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 100.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 97.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 97.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 96.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 94.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 93.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 92.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 92.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 92.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 92.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 92.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 91.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 91.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 89.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 89.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 89.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 88.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 87.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 86.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 86.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 86.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 86.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 85.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 84.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 84.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 84.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 83.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 82.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 81.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 81.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 81.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 81.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 81.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 81.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 80.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 80.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 80.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 80.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 80.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 80.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 79.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 79.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 79.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 78.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 78.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 78.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 78.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 78.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 77.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 77.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 77.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 77.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 77.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 77.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 76.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 76.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 76.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 76.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 76.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 76.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 76.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 76.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 75.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 75.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 75.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 75.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 75.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 75.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 74.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 74.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 74.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 74.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 74.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 74.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 74.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 74.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 74.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 73.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 73.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 73.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 73.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 73.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 73.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 73.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 73.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 72.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 72.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 71.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 71.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 71.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 71.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 70.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 70.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 70.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 69.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 69.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 69.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 69.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 69.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 69.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 69.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 69.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 69.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 68.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 68.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 67.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 67.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 67.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 67.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 67.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 67.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 67.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 67.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 67.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 66.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 66.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 66.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 66.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 65.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 65.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 65.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 65.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 65.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 65.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 64.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 64.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 64.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 64.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 64.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 63.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 62.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 62.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 62.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 62.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 62.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 62.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 61.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 61.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 61.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 61.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 61.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 61.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 60.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 60.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 60.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 60.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 59.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 59.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 59.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 59.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 58.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 58.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 58.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 58.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 57.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 57.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 57.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 57.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 57.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 56.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 56.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 56.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 56.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 55.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 55.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 55.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 55.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 54.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 54.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 54.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 54.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 54.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 54.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 53.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 53.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 53.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 53.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 52.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 52.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 51.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 51.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 51.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 51.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 51.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 50.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 50.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 50.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 49.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 48.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 47.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 47.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 46.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 46.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 46.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 46.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 46.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 46.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 45.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 44.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 44.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 44.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 44.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 43.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 43.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 42.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 42.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 41.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 40.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 40.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 40.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 40.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 40.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 39.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 38.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 38.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 38.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 37.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 36.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 34.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 32.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 30.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 28.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

244.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 244.7
Samples: 4

Max nTPM: 329.1
Min nTPM: 163.7
Sample A Female 329.1
Sample B Female 244.9
Sample C Male 240.9
Sample D Male 163.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

183.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 183.1
Samples: 4

Max nTPM: 189.9
Min nTPM: 173.2
Sample A Male 173.2
Sample B Male 187.0
Sample C Female 182.3
Sample D Female 189.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.6
71570736 Antisense, RP_050505_01_H05, Mouse strain C57BL/6J (56 days, male) 11.9
76115734 Antisense, RP_060620_02_C02, Mouse strain C57BL/6J (56 days, male) 11.3

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