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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPL13
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:523.0 nTPM
GTEx:1057.9 nTPM
FANTOM5:102.5 Scaled Tags Per Million
Macaque:112.9 nTPM
Pig:3.4 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

523.0
Sample id Sample description nTPM
Putamen
nTPM: 523.0
2466 Female, age 79, unknown 607.3
2647 Male, age 75, left hemisphere 569.8
2489 Female, age 72, unknown 563.7
1937 Female, age 91, right hemisphere 544.0
2482 Female, age 94, left hemisphere 519.2
1838 Male, age 80, right hemisphere 440.9
1829 Male, age 74, unknown 415.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1057.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1057.9
Samples: 254

Max nTPM: 2577.2
Min nTPM: 467.7
Std nTPM: 352.5
Median nTPM: 979.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 2577.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 2290.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 2213.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2101.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 2084.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2070.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1930.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1912.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1903.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1879.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1868.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1864.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1856.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1815.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1765.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1668.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1651.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1625.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1581.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1575.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1541.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1534.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1532.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1515.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1512.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1510.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1508.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1495.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1492.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1480.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1470.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1443.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1442.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1432.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1427.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1426.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1423.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1377.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1377.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1374.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1369.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1364.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1357.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1353.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1352.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1346.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1344.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1335.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1334.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1305.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1297.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1297.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1297.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1292.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1269.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1264.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1257.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1254.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1253.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1248.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1244.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1242.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1230.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1214.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1211.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1210.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1210.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1196.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1194.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1193.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1193.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1167.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1157.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1154.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1151.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1151.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1144.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1143.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1142.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1140.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1137.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1132.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1129.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1125.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1122.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1119.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 1119.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1118.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1112.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1104.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1102.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1101.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1101.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1100.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1100.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1097.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1097.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1096.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1092.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 1090.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1086.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1079.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1072.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1071.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1067.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1062.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1060.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1057.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1055.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1047.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1047.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1045.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1041.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1033.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1031.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1027.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1019.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1014.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1012.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1006.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1003.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1002.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1002.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 991.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 990.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 985.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 981.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 978.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 968.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 967.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 965.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 965.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 962.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 961.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 958.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 953.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 951.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 948.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 942.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 941.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 940.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 940.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 938.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 936.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 936.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 933.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 931.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 929.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 926.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 926.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 914.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 914.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 909.2
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 909.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 908.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 904.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 904.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 890.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 890.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 889.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 888.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 886.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 885.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 883.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 881.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 880.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 880.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 878.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 877.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 877.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 875.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 869.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 866.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 861.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 857.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 856.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 855.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 853.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 850.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 850.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 849.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 845.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 844.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 844.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 839.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 834.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 833.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 832.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 828.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 828.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 827.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 826.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 822.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 820.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 816.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 814.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 814.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 810.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 809.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 809.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 804.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 803.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 802.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 799.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 798.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 796.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 790.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 776.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 770.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 763.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 757.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 750.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 747.7
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 742.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 731.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 724.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 718.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 709.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 708.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 708.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 702.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 699.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 684.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 684.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 672.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 664.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 661.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 659.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 657.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 656.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 647.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 643.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 642.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 641.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 631.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 627.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 625.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 623.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 621.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 621.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 617.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 617.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 605.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 605.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 604.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 592.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 584.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 584.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 582.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 564.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 557.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 553.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 545.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 467.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

102.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 102.5
FF:10176-103C5 60 years, female 102.5

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.9
Macaque sample Sample description nTPM
Putamen
nTPM: 112.9
Samples: 2

Max nTPM: 131.1
Min nTPM: 94.8
Sample A 131.1
Sample B 94.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.4
Pig sample Sample description nTPM
Putamen
nTPM: 3.4
Samples: 3

Max nTPM: 4.9
Min nTPM: 1.0
Sample B Female 4.4
Sample C Male 1.0
Sample D Male 4.9

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