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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:101.3 nTPM
HPA Brain:139.1 nTPM
GTEx:101.3 nTPM
Pig:16.9 nTPM
Mouse:49.2 nTPM
Allen mouse:5.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 139.1
2226 Male, age 75, left hemisphere 168.9
1961 Female, age 42, unknown 109.3
Dorsomedial nucleus
nTPM: 78.9
2041 Female, age 72, unknown 120.6
2017 Female, age 42, unknown 72.7
1989 Male, age 62, unknown 43.4
Lateral hypothalamic area
nTPM: 80.3
2228 Male, age 66, unknown 98.1
1791 Male, age 80, right hemisphere 79.6
2271 Male, age 75, both hemispheres 74.3
2412 Male, age 62, unknown 69.3
Mammillary body
nTPM: 39.3
1945 Male, age 80, right hemisphere 46.7
1948 Female, age 72, unknown 46.1
2413 Male, age 66, unknown 37.8
1923 Female, age 72, unknown 37.7
1834 Female, age 42, unknown 27.9
Paraventricular nucleus
nTPM: 81.5
2700 Male, age 62, unknown 81.5
Preoptic area
nTPM: 67.0
1907 Male, age 80, right hemisphere 80.0
2414 Female, age 72, unknown 63.0
1861 Female, age 42, unknown 58.1
Supraoptic nucleus
nTPM: 62.5
2835 Female, age 72, unknown 79.2
1894 Female, age 72, unknown 59.4
2043 Male, age 62, unknown 49.0
Ventromedial nucleus
nTPM: 90.1
1822 Female, age 42, unknown 90.5
1982 Female, age 72, unknown 89.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 101.3
Samples: 257

Max nTPM: 241.6
Min nTPM: 15.9
Std nTPM: 53.0
Median nTPM: 97.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 241.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 228.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 226.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 224.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 219.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 216.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 213.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 211.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 209.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 208.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 204.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 199.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 198.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 194.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 192.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 188.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 187.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 184.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 180.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 180.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 179.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 179.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 179.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 176.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 176.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 176.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 175.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 175.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 174.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 174.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 173.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 172.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 171.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 167.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 166.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 164.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 164.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 163.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 163.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 161.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 161.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 161.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 159.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 158.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 157.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 157.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 156.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 155.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 153.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 151.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 150.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 149.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 147.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 147.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 147.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 147.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 145.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 144.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 141.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 140.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 139.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 138.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 137.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 137.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 135.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 135.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 134.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 134.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 132.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 132.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 132.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 131.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 131.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 131.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 130.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 129.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 129.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 129.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 128.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 127.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 127.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 127.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 126.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 125.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 124.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 124.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 123.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 122.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 122.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 121.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 120.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 118.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 117.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 117.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 116.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 116.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 116.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 116.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 114.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 114.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 114.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 113.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 113.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 113.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 112.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 112.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 112.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 111.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 111.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 111.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 110.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 109.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 109.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 108.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 108.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 108.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 107.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 107.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 106.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 105.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 104.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 101.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 101.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 101.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 101.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 100.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 99.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 98.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 97.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 95.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 94.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 93.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 91.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 90.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 90.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 89.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 89.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 88.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 88.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 88.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 88.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 88.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 87.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 87.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 85.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 85.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 84.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 84.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 84.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 84.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 83.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 82.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 82.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 81.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 79.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 79.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 79.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 78.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 78.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 78.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 77.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 77.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 77.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 77.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 74.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 74.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 74.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 72.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 72.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 72.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 72.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 72.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 71.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 71.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 70.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 70.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 69.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 69.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 68.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 68.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 67.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 65.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 65.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 64.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 64.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 63.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 62.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 62.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 61.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 60.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 59.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 59.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 57.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 57.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 55.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 54.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 53.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 53.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 52.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 50.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 49.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 49.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 49.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 48.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 46.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 44.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 44.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 44.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 44.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 43.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 42.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 41.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 41.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 41.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 41.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 40.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 40.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 40.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 39.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 39.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 39.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 38.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 38.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 37.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 36.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 36.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 36.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 36.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 34.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 32.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 32.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 31.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 31.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 31.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 30.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 30.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 30.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 29.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 28.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 28.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 28.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 28.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 28.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 27.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 27.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 27.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 26.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 25.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 25.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 24.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 24.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 23.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 22.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 21.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 21.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 17.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 15.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 16.9
Samples: 4

Max nTPM: 21.5
Min nTPM: 9.9
Sample A Female 21.5
Sample B Female 15.6
Sample C Male 20.6
Sample D Male 9.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 49.2
Samples: 4

Max nTPM: 56.6
Min nTPM: 42.8
Sample A Male 51.2
Sample B Male 56.6
Sample C Female 46.3
Sample D Female 42.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.2
70565264 Antisense, RP_050623_04_F02, Mouse strain C57BL/6J (56 days, male) 7.2
74047774 Antisense, RP_051214_01_H11, Mouse strain C57BL/6J (56 days, male) 3.2

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