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  • KLK6
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:492.8 nTPM
HPA Brain:171.7 nTPM
GTEx:492.8 nTPM
FANTOM5:381.0 Scaled Tags Per Million
Pig:448.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 149.9
1981 Female, age 72, midline 196.4
2816 Male, age 47, midline 163.9
2194 Female, age 79, both hemispheres 140.4
2048 Male, age 55, midline 137.1
2565 Male, age 75, midline 111.9
Cervical spinal cord, dorsal horn
nTPM: 171.7
2296 Male, age 66, both hemispheres 367.7
2173 Female, age 72, unknown 263.9
2069 Male, age 47, both hemispheres 147.3
1877 Male, age 55, unknown 124.2
2721 Male, age 90, both hemispheres 77.0
2297 Male, age 75, both hemispheres 50.0
Cervical spinal cord, ventral horn
nTPM: 161.1
2098 Female, age 72, unknown 202.7
2820 Female, age 79, both hemispheres 183.3
2068 Male, age 55, unknown 172.4
2480 Male, age 75, both hemispheres 160.6
2809 Male, age 90, both hemispheres 135.3
2295 Male, age 66, both hemispheres 112.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

492.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 492.8
Samples: 204

Max nTPM: 1050.6
Min nTPM: 73.1
Std nTPM: 199.3
Median nTPM: 480.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1050.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 987.4
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 978.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 962.0
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 953.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 928.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 923.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 890.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 861.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 830.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 822.6
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 810.4
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 792.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 784.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 779.3
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 772.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 764.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 764.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 747.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 745.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 736.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 736.4
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 735.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 734.6
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 732.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 725.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 719.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 714.3
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 698.8
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 697.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 696.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 693.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 681.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 676.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 674.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 674.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 673.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 673.6
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 662.7
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 661.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 661.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 658.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 652.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 645.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 639.9
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 639.5
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 639.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 634.3
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 633.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 631.1
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 630.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 629.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 629.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 627.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 626.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 626.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 625.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 624.7
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 619.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 617.7
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 614.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 608.0
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 605.0
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 604.7
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 599.3
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 595.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 594.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 592.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 591.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 591.3
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 590.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 586.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 577.8
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 562.4
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 560.2
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 558.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 555.3
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 553.6
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 550.7
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 549.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 546.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 546.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 544.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 542.9
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 540.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 536.5
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 536.0
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 532.9
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 531.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 527.1
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 523.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 516.6
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 513.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 511.1
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 506.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 501.9
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 497.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 492.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 488.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 488.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 487.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 482.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 478.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 474.0
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 471.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 470.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 469.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 468.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 464.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 464.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 463.6
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 460.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 457.7
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 452.5
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 450.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 450.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 446.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 439.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 439.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 438.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 430.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 424.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 422.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 420.3
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 413.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 412.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 411.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 409.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 407.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 406.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 405.2
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 404.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 402.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 402.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 402.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 396.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 394.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 392.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 392.7
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 391.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 390.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 388.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 386.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 386.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 374.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 373.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 372.8
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 371.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 370.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 368.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 364.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 360.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 360.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 359.8
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 349.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 348.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 346.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 343.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 337.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 336.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 319.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 318.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 315.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 314.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 303.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 300.4
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 299.6
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 297.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 290.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 286.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 285.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 282.3
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 274.2
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 265.7
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 263.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 251.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 248.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 245.2
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 239.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 239.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 238.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 224.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 222.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 214.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 213.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 209.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 207.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 205.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 204.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 198.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 197.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 196.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 195.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 192.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 185.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 177.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 171.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 170.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 163.5
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 162.8
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 106.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 97.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 80.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 73.1
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

381.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 381.0
FF:10181-103D1 60 years, female 514.7
FF:10159-103A6 76 years, female 247.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

448.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 314.1
Samples: 4

Max nTPM: 343.2
Min nTPM: 291.9
Sample A Female 292.3
Sample B Female 291.9
Sample C Male 343.2
Sample D Male 328.8
Ventral spinal cord
nTPM: 448.7
Samples: 4

Max nTPM: 593.1
Min nTPM: 361.9
Sample A Female 428.4
Sample B Female 361.9
Sample C Male 411.4
Sample D Male 593.1

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