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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:355.5 nTPM
HPA Brain:393.7 nTPM
GTEx:355.5 nTPM
Pig:275.0 nTPM
Mouse:305.3 nTPM
Allen mouse:0.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

393.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 326.6
2226 Male, age 75, left hemisphere 438.3
1961 Female, age 42, unknown 214.9
Dorsomedial nucleus
nTPM: 272.6
1989 Male, age 62, unknown 373.7
2041 Female, age 72, unknown 244.6
2017 Female, age 42, unknown 199.5
Lateral hypothalamic area
nTPM: 370.1
1791 Male, age 80, right hemisphere 462.6
2271 Male, age 75, both hemispheres 401.9
2228 Male, age 66, unknown 342.4
2412 Male, age 62, unknown 273.7
Mammillary body
nTPM: 393.7
1923 Female, age 72, unknown 650.2
2413 Male, age 66, unknown 388.8
1948 Female, age 72, unknown 323.7
1945 Male, age 80, right hemisphere 304.7
1834 Female, age 42, unknown 300.9
Paraventricular nucleus
nTPM: 212.0
2700 Male, age 62, unknown 212.0
Preoptic area
nTPM: 277.9
1907 Male, age 80, right hemisphere 329.4
1861 Female, age 42, unknown 257.6
2414 Female, age 72, unknown 246.8
Supraoptic nucleus
nTPM: 288.8
2835 Female, age 72, unknown 336.4
1894 Female, age 72, unknown 308.2
2043 Male, age 62, unknown 222.0
Ventromedial nucleus
nTPM: 218.7
1982 Female, age 72, unknown 247.2
1822 Female, age 42, unknown 190.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

355.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 355.5
Samples: 257

Max nTPM: 640.3
Min nTPM: 172.5
Std nTPM: 88.6
Median nTPM: 351.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 640.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 624.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 599.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 585.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 568.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 568.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 567.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 561.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 547.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 544.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 526.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 523.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 521.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 517.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 511.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 508.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 507.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 507.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 498.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 496.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 489.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 489.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 487.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 484.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 481.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 478.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 474.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 471.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 464.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 464.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 462.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 458.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 458.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 456.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 449.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 448.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 443.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 441.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 441.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 441.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 433.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 433.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 431.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 426.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 425.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 423.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 423.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 423.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 420.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 419.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 419.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 418.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 418.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 417.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 417.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 415.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 415.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 413.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 412.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 411.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 407.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 406.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 404.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 404.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 403.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 403.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 403.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 401.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 398.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 398.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 398.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 397.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 396.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 395.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 395.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 394.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 394.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 393.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 393.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 392.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 391.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 390.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 389.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 388.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 388.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 388.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 386.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 382.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 380.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 378.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 378.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 377.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 375.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 374.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 373.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 372.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 372.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 372.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 371.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 370.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 370.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 369.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 369.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 368.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 368.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 368.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 368.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 367.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 367.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 367.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 366.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 366.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 365.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 364.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 363.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 362.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 361.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 360.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 358.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 357.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 357.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 353.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 352.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 352.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 352.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 352.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 352.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 351.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 351.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 349.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 348.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 348.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 347.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 347.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 347.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 346.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 344.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 344.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 342.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 341.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 340.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 340.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 339.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 339.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 338.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 337.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 335.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 335.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 334.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 334.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 333.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 332.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 330.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 330.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 330.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 330.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 328.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 327.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 326.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 324.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 323.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 322.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 322.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 321.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 320.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 320.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 320.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 319.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 318.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 318.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 317.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 316.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 316.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 314.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 313.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 313.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 312.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 311.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 310.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 309.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 302.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 301.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 299.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 299.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 298.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 297.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 297.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 295.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 295.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 295.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 294.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 293.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 293.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 290.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 290.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 289.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 289.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 289.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 289.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 287.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 284.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 284.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 284.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 281.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 280.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 279.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 278.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 276.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 276.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 276.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 274.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 271.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 267.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 266.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 266.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 266.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 266.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 265.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 265.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 264.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 264.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 262.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 261.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 261.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 261.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 256.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 254.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 253.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 253.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 252.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 251.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 250.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 250.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 245.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 244.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 242.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 241.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 237.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 236.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 235.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 233.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 227.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 224.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 224.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 224.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 222.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 217.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 203.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 198.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 195.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 190.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 185.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 185.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 183.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 179.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 176.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 172.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

275.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 275.0
Samples: 4

Max nTPM: 346.4
Min nTPM: 206.9
Sample A Female 346.4
Sample B Female 281.5
Sample C Male 265.1
Sample D Male 206.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

305.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 305.3
Samples: 4

Max nTPM: 333.3
Min nTPM: 289.4
Sample A Male 289.4
Sample B Male 333.3
Sample C Female 302.0
Sample D Female 296.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.3
75233570 Antisense, RP_051121_03_C01, Mouse strain C57BL/6J (56 days, male) 0.3

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