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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:302.5 nTPM
HPA Brain:159.3 nTPM
GTEx:302.5 nTPM
Pig:6.2 nTPM
Mouse:794.7 nTPM
Allen mouse:11.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 136.6
2226 Male, age 75, left hemisphere 178.2
1961 Female, age 42, unknown 94.9
Dorsomedial nucleus
nTPM: 111.0
1989 Male, age 62, unknown 121.0
2041 Female, age 72, unknown 111.0
2017 Female, age 42, unknown 101.1
Lateral hypothalamic area
nTPM: 150.1
2228 Male, age 66, unknown 193.7
1791 Male, age 80, right hemisphere 156.3
2271 Male, age 75, both hemispheres 152.6
2412 Male, age 62, unknown 97.7
Mammillary body
nTPM: 159.3
1923 Female, age 72, unknown 246.0
2413 Male, age 66, unknown 143.7
1948 Female, age 72, unknown 143.6
1834 Female, age 42, unknown 137.3
1945 Male, age 80, right hemisphere 125.9
Paraventricular nucleus
nTPM: 120.4
2700 Male, age 62, unknown 120.4
Preoptic area
nTPM: 115.5
1907 Male, age 80, right hemisphere 135.2
1861 Female, age 42, unknown 110.0
2414 Female, age 72, unknown 101.1
Supraoptic nucleus
nTPM: 125.0
1894 Female, age 72, unknown 139.3
2835 Female, age 72, unknown 125.0
2043 Male, age 62, unknown 110.8
Ventromedial nucleus
nTPM: 109.7
1982 Female, age 72, unknown 117.5
1822 Female, age 42, unknown 101.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

302.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 302.5
Samples: 257

Max nTPM: 576.6
Min nTPM: 153.8
Std nTPM: 69.8
Median nTPM: 293.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 576.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 534.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 503.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 490.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 488.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 481.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 477.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 475.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 469.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 464.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 463.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 452.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 450.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 448.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 433.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 431.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 415.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 413.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 409.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 408.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 398.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 392.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 391.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 389.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 389.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 386.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 385.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 384.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 384.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 383.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 379.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 379.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 378.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 376.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 376.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 375.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 374.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 374.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 373.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 371.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 369.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 366.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 366.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 365.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 364.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 364.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 358.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 357.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 356.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 355.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 355.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 353.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 353.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 353.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 353.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 353.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 345.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 344.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 342.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 340.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 340.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 340.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 338.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 338.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 338.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 333.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 332.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 332.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 331.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 329.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 329.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 329.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 329.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 328.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 328.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 328.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 328.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 326.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 325.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 325.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 325.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 325.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 324.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 324.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 319.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 319.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 317.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 316.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 316.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 316.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 316.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 316.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 316.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 316.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 315.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 314.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 313.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 313.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 312.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 312.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 312.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 311.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 310.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 310.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 308.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 308.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 307.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 306.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 305.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 305.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 304.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 303.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 303.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 303.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 301.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 300.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 300.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 300.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 299.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 298.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 298.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 297.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 295.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 295.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 295.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 294.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 294.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 293.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 293.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 292.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 292.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 291.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 291.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 291.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 290.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 290.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 290.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 289.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 289.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 288.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 287.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 286.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 286.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 286.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 285.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 285.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 285.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 284.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 284.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 283.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 283.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 282.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 281.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 280.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 280.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 280.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 279.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 279.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 278.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 278.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 278.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 277.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 277.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 276.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 276.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 275.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 272.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 272.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 272.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 270.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 270.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 269.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 269.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 267.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 266.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 263.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 262.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 262.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 262.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 261.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 261.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 261.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 260.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 260.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 258.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 257.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 257.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 256.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 256.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 256.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 255.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 255.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 255.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 254.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 254.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 251.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 249.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 249.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 249.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 248.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 248.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 247.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 245.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 244.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 244.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 243.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 243.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 243.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 243.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 242.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 238.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 236.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 236.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 236.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 235.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 234.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 234.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 233.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 233.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 233.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 232.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 231.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 230.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 230.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 229.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 228.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 227.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 225.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 222.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 221.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 221.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 220.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 217.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 216.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 216.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 216.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 214.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 214.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 214.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 213.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 211.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 206.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 206.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 205.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 205.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 204.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 202.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 202.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 198.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 196.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 196.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 194.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 194.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 190.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 178.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 165.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 153.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 6.2
Samples: 4

Max nTPM: 9.5
Min nTPM: 3.1
Sample A Female 3.1
Sample B Female 6.2
Sample C Male 6.0
Sample D Male 9.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

794.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 794.6
Samples: 4

Max nTPM: 848.7
Min nTPM: 734.0
Sample A Male 734.0
Sample B Male 848.7
Sample C Female 830.9
Sample D Female 764.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.1
67765702 Antisense, RP_040916_01_D05, Mouse strain C57BL/6J (56 days, male) 11.1
77371785 Antisense, RP_070116_01_C02, Mouse strain C57BL/6J (56 days, male) 11.0

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