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  • SUMMARY

  • TISSUE

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  • FTH1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:4258.0 nTPM
HPA Brain:3962.7 nTPM
GTEx:4258.0 nTPM
Mouse:2039.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3962.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 2197.9
2226 Male, age 75, left hemisphere 2474.3
1961 Female, age 42, unknown 1921.4
Dorsomedial nucleus
nTPM: 2504.8
1989 Male, age 62, unknown 2954.5
2017 Female, age 42, unknown 2721.6
2041 Female, age 72, unknown 1838.4
Lateral hypothalamic area
nTPM: 3080.2
2271 Male, age 75, both hemispheres 4146.6
2412 Male, age 62, unknown 2762.8
2228 Male, age 66, unknown 2723.3
1791 Male, age 80, right hemisphere 2688.2
Mammillary body
nTPM: 3569.8
1948 Female, age 72, unknown 4236.7
1834 Female, age 42, unknown 4002.0
1923 Female, age 72, unknown 3604.8
2413 Male, age 66, unknown 3125.5
1945 Male, age 80, right hemisphere 2880.0
Paraventricular nucleus
nTPM: 3962.7
2700 Male, age 62, unknown 3962.7
Preoptic area
nTPM: 2398.7
1861 Female, age 42, unknown 3155.7
2414 Female, age 72, unknown 2552.2
1907 Male, age 80, right hemisphere 1488.1
Supraoptic nucleus
nTPM: 3934.9
1894 Female, age 72, unknown 4338.2
2043 Male, age 62, unknown 3972.4
2835 Female, age 72, unknown 3494.1
Ventromedial nucleus
nTPM: 2015.2
1982 Female, age 72, unknown 2213.9
1822 Female, age 42, unknown 1816.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4258.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 4258.0
Samples: 257

Max nTPM: 20014.7
Min nTPM: 1484.7
Std nTPM: 2183.4
Median nTPM: 3851.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 20014.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 13655.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 13102.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 11729.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 11643.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 10936.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 9760.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 9531.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 9145.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 8803.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 8411.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 8327.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 8212.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 8066.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 7978.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 7481.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 7377.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 7304.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 7178.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 7034.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 7021.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 6964.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 6909.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 6451.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 6379.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 6345.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 6297.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 6260.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 6215.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 6211.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 6010.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 5977.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 5976.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 5958.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 5934.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 5922.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 5863.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 5862.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 5850.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 5848.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 5797.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 5753.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 5711.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 5701.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 5649.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 5595.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 5549.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 5537.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 5529.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 5474.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 5403.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 5383.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 5371.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 5320.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 5278.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 5265.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 5200.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 5189.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 5134.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 5124.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 5099.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 5098.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 5080.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 5018.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 4988.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 4965.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 4871.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 4849.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 4846.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 4833.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 4830.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 4828.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 4826.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 4823.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 4818.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 4784.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 4770.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 4762.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 4736.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 4734.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 4608.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 4605.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 4592.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 4540.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 4537.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 4500.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 4494.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 4477.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 4476.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 4476.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 4462.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 4431.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 4415.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 4410.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 4402.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 4395.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 4391.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 4372.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 4356.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 4324.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 4321.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 4300.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 4298.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 4287.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 4270.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 4265.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 4252.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 4248.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 4218.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 4209.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 4199.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 4184.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 4168.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 4166.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 4162.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 4160.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 4130.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 4101.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 4096.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 4073.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 4025.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 3929.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 3917.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 3890.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 3887.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 3882.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 3872.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 3855.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 3851.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 3847.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 3846.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 3775.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 3773.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 3743.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 3721.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 3691.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 3688.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 3650.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 3645.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 3640.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 3619.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 3596.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 3584.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 3579.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 3569.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 3561.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 3552.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 3527.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 3486.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 3472.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 3462.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 3462.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 3400.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 3368.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 3317.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 3301.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 3267.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 3246.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 3241.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 3203.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 3200.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 3196.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 3195.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 3175.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 3145.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 3108.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 3099.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 3091.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 3080.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 3055.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 3034.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 3030.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 3023.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 3022.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 3007.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 2995.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 2968.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 2964.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 2962.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 2953.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 2911.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 2909.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 2907.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 2905.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 2900.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 2894.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 2889.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 2875.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 2852.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 2842.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 2834.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 2832.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 2825.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 2810.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 2805.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 2800.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 2797.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 2793.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 2771.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 2761.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 2761.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 2750.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 2742.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 2737.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 2734.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 2728.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 2721.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 2690.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 2680.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 2666.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 2658.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 2630.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 2612.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 2611.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 2606.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 2602.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 2600.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 2596.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 2577.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 2561.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 2558.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 2474.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 2472.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 2457.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 2453.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 2439.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 2439.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 2436.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 2409.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 2347.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 2315.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 2285.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 2255.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 2223.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 2221.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 2210.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 2164.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 2159.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 2148.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 2136.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 2124.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 2104.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 2083.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 2073.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 2051.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 1996.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1963.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 1911.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 1871.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 1869.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 1827.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 1704.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 1643.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1608.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 1524.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 1517.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 1484.7
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2039.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 2039.1
Samples: 4

Max nTPM: 2179.5
Min nTPM: 1753.3
Sample A Male 1753.3
Sample B Male 2121.4
Sample C Female 2179.5
Sample D Female 2102.2

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