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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:737.5 nTPM
HPA Brain:312.0 nTPM
GTEx:737.5 nTPM
Mouse:319.5 nTPM
Allen mouse:21.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

312.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 276.0
1961 Female, age 42, unknown 324.1
2226 Male, age 75, left hemisphere 227.9
Dorsomedial nucleus
nTPM: 264.1
2017 Female, age 42, unknown 305.4
2041 Female, age 72, unknown 268.4
1989 Male, age 62, unknown 218.7
Lateral hypothalamic area
nTPM: 284.7
2412 Male, age 62, unknown 311.5
2228 Male, age 66, unknown 307.5
1791 Male, age 80, right hemisphere 287.9
2271 Male, age 75, both hemispheres 231.9
Mammillary body
nTPM: 238.3
1945 Male, age 80, right hemisphere 269.1
1948 Female, age 72, unknown 252.1
1834 Female, age 42, unknown 246.0
2413 Male, age 66, unknown 215.9
1923 Female, age 72, unknown 208.4
Paraventricular nucleus
nTPM: 269.6
2700 Male, age 62, unknown 269.6
Preoptic area
nTPM: 272.0
1861 Female, age 42, unknown 317.2
1907 Male, age 80, right hemisphere 265.0
2414 Female, age 72, unknown 233.8
Supraoptic nucleus
nTPM: 294.8
2043 Male, age 62, unknown 302.0
2835 Female, age 72, unknown 295.0
1894 Female, age 72, unknown 287.2
Ventromedial nucleus
nTPM: 312.0
1982 Female, age 72, unknown 335.0
1822 Female, age 42, unknown 288.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

737.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 737.5
Samples: 257

Max nTPM: 2669.5
Min nTPM: 386.4
Std nTPM: 269.6
Median nTPM: 656.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 2669.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1790.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1780.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1650.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1586.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1532.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1453.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1365.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1348.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1347.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1244.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1223.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1212.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1205.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1201.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1191.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1176.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1154.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1141.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1113.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1110.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1104.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1063.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1057.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1057.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1054.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1040.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1027.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1024.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1017.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1004.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1001.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 999.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 974.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 969.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 966.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 966.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 965.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 959.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 955.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 954.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 953.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 945.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 944.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 931.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 929.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 924.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 916.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 909.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 908.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 890.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 886.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 880.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 861.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 859.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 856.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 851.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 851.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 847.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 842.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 827.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 826.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 825.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 823.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 823.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 821.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 818.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 818.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 811.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 804.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 804.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 794.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 791.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 783.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 782.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 780.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 777.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 774.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 771.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 769.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 768.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 765.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 765.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 764.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 760.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 755.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 752.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 752.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 750.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 749.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 748.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 748.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 746.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 746.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 745.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 744.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 740.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 736.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 734.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 731.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 730.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 728.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 726.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 724.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 722.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 720.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 717.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 715.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 710.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 710.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 709.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 708.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 706.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 705.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 703.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 697.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 693.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 693.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 693.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 691.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 691.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 686.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 681.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 677.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 677.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 672.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 664.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 662.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 656.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 654.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 654.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 652.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 651.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 649.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 645.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 644.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 644.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 641.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 639.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 639.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 638.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 637.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 637.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 634.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 632.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 631.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 631.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 631.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 627.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 625.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 625.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 624.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 621.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 621.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 620.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 619.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 616.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 615.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 614.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 614.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 613.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 611.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 608.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 607.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 607.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 606.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 606.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 605.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 603.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 601.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 601.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 599.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 598.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 597.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 595.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 595.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 589.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 589.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 588.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 588.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 588.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 587.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 582.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 582.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 580.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 578.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 575.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 573.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 572.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 570.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 569.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 569.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 566.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 565.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 564.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 563.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 561.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 560.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 558.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 557.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 557.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 553.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 552.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 551.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 546.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 546.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 545.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 544.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 543.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 541.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 540.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 540.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 538.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 535.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 534.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 533.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 531.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 530.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 528.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 525.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 525.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 523.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 523.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 522.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 521.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 519.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 516.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 513.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 512.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 511.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 511.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 510.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 507.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 503.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 497.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 497.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 496.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 491.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 486.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 485.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 482.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 478.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 468.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 465.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 459.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 454.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 453.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 453.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 450.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 448.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 439.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 430.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 406.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 406.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 401.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 401.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 386.4
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

319.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 319.5
Samples: 4

Max nTPM: 378.2
Min nTPM: 294.0
Sample A Male 297.5
Sample B Male 378.2
Sample C Female 294.0
Sample D Female 308.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 21.3
77620255 Antisense, RP_070129_04_C07, Mouse strain C57BL/6J (56 days, male) 21.3

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