We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PCBP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • PCBP1
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
Brain methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:137.8 nTPM
HPA Brain:143.7 nTPM
GTEx:137.8 nTPM
FANTOM5:286.3 Scaled Tags Per Million
Pig:116.9 nTPM
Mouse:111.9 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

143.7
Sample id Sample description nTPM
Amygdala
nTPM: 143.7
2814 Male, age 76, right hemisphere 153.8
2514 Male, age 75, right hemisphere 146.0
1987 Female, age 91, left hemisphere 145.0
2695 Female, age 67, right hemisphere 137.7
2517 Female, age 94, left hemisphere 136.0
Basal amygdala
nTPM: 112.0
2609 Male, age 75, right hemisphere 137.3
2110 Male, age 80, left hemisphere 120.2
1955 Male, age 76, both hemispheres 116.3
2685 Female, age 94, left hemisphere 109.8
2243 Female, age 91, right hemisphere 95.4
2827 Female, age 67, right hemisphere 93.3
Central amygdala
nTPM: 127.0
2826 Female, age 94, left hemisphere 151.9
1905 Male, age 76, both hemispheres 131.7
2515 Male, age 75, right hemisphere 131.7
2239 Male, age 80, left hemisphere 112.9
2701 Female, age 91, right hemisphere 106.7
Corticomedial amygdala
nTPM: 106.0
2428 Male, age 75, right hemisphere 121.8
2829 Male, age 80, left hemisphere 119.4
2429 Female, age 94, left hemisphere 104.1
2242 Female, age 91, right hemisphere 103.2
2240 Male, age 76, both hemispheres 98.8
2535 Female, age 67, right hemisphere 88.7
Lateral amygdala
nTPM: 119.7
2534 Female, age 94, left hemisphere 133.0
1883 Male, age 76, both hemispheres 130.7
2516 Male, age 75, right hemisphere 129.8
2256 Male, age 80, left hemisphere 122.1
2830 Female, age 67, right hemisphere 101.5
2255 Female, age 91, right hemisphere 101.1

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 137.8
Samples: 181

Max nTPM: 269.8
Min nTPM: 75.5
Std nTPM: 24.9
Median nTPM: 133.7
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 269.8
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 245.4
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 229.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 208.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 195.5
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 191.3
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 181.2
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 179.8
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 179.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 178.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 175.7
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 175.6
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 174.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 174.5
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 171.4
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 170.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 168.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 164.4
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 164.3
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 161.8
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 161.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 160.4
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 158.7
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 157.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 157.3
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 157.3
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 156.2
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 155.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 155.7
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 155.7
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 155.2
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 154.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 154.6
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 154.1
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 153.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 153.4
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 153.0
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 152.9
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 152.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 152.2
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 151.9
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 150.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 149.8
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 149.1
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 149.0
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 148.9
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 148.7
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 148.5
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 148.5
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 147.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 147.1
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 146.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 146.9
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 146.0
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 145.7
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 145.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 145.5
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 144.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 143.7
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 143.3
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 143.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 142.2
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 142.0
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 141.9
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 141.1
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 141.0
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 141.0
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 141.0
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 140.9
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 140.6
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 140.1
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 139.8
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 139.6
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 139.6
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 139.5
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 139.3
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 139.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 138.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 138.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 138.4
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 138.1
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 136.8
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 136.4
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 136.2
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 135.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 135.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 134.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 134.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 134.0
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 134.0
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 133.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 133.4
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 133.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 133.3
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 133.2
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 133.0
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 132.9
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 132.8
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 132.8
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 132.5
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 132.5
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 132.4
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 131.7
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 131.5
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 130.9
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 130.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 130.1
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 129.8
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 129.7
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 129.5
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 129.2
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 129.0
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 128.9
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 128.7
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 128.4
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 126.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 126.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 126.8
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 126.3
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 126.1
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 126.1
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 125.7
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 125.5
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 125.4
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 124.9
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 124.6
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 124.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 123.9
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 123.8
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 123.7
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 123.5
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 123.0
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 122.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 122.9
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 122.6
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 122.5
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 122.4
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 122.4
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 121.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 121.4
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 121.3
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 120.9
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 120.9
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 120.8
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 120.8
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 120.0
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 120.0
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 119.9
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 119.1
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 118.9
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 117.0
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 116.9
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 116.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 116.0
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 115.3
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 115.2
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 114.7
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 114.6
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 114.5
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 114.2
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 114.1
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 111.9
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 111.4
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 111.4
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 111.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 111.0
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 110.5
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 110.4
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 110.0
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 109.9
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 109.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 108.7
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 104.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 103.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 102.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 100.9
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 100.9
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 100.7
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 98.1
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 91.5
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 75.5
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

286.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 286.3
FF:10151-102I7 76 years, female 286.3

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.9
Pig sample Sample description nTPM
Amygdala
nTPM: 116.9
Samples: 4

Max nTPM: 158.2
Min nTPM: 94.9
Sample A Female 158.2
Sample B Female 108.0
Sample C Male 94.9
Sample D Male 106.5

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 111.9
Samples: 4

Max nTPM: 121.5
Min nTPM: 103.7
Sample A Male 116.8
Sample B Male 105.5
Sample C Female 121.5
Sample D Female 103.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo