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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:257.2 nTPM
HPA Brain:115.0 nTPM
GTEx:257.2 nTPM
Pig:171.2 nTPM
Mouse:392.9 nTPM
Allen mouse:8.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

115.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 103.6
2226 Male, age 75, left hemisphere 130.3
1961 Female, age 42, unknown 77.0
Dorsomedial nucleus
nTPM: 80.8
1989 Male, age 62, unknown 88.0
2041 Female, age 72, unknown 87.3
2017 Female, age 42, unknown 67.1
Lateral hypothalamic area
nTPM: 115.0
1791 Male, age 80, right hemisphere 131.0
2228 Male, age 66, unknown 130.2
2271 Male, age 75, both hemispheres 117.4
2412 Male, age 62, unknown 81.4
Mammillary body
nTPM: 112.2
1923 Female, age 72, unknown 175.9
2413 Male, age 66, unknown 112.9
1948 Female, age 72, unknown 100.4
1945 Male, age 80, right hemisphere 86.7
1834 Female, age 42, unknown 85.1
Paraventricular nucleus
nTPM: 72.5
2700 Male, age 62, unknown 72.5
Preoptic area
nTPM: 87.4
1907 Male, age 80, right hemisphere 110.0
1861 Female, age 42, unknown 80.8
2414 Female, age 72, unknown 71.5
Supraoptic nucleus
nTPM: 98.2
1894 Female, age 72, unknown 117.2
2043 Male, age 62, unknown 99.5
2835 Female, age 72, unknown 77.8
Ventromedial nucleus
nTPM: 93.1
1982 Female, age 72, unknown 104.6
1822 Female, age 42, unknown 81.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

257.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 257.2
Samples: 257

Max nTPM: 561.9
Min nTPM: 146.1
Std nTPM: 69.0
Median nTPM: 245.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 561.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 530.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 495.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 490.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 484.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 431.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 422.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 417.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 416.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 411.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 402.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 397.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 379.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 379.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 377.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 374.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 371.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 359.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 358.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 356.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 351.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 348.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 347.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 347.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 347.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 345.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 342.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 339.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 334.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 331.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 330.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 329.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 328.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 327.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 327.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 326.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 325.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 324.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 321.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 320.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 318.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 318.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 316.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 315.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 315.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 314.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 313.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 313.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 311.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 311.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 308.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 308.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 304.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 303.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 303.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 301.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 301.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 300.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 300.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 299.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 298.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 298.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 296.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 295.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 292.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 289.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 289.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 289.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 288.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 288.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 286.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 286.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 285.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 284.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 282.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 281.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 281.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 281.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 279.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 276.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 275.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 275.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 275.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 274.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 274.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 273.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 272.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 271.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 270.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 270.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 269.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 269.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 268.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 267.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 267.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 266.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 265.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 265.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 263.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 263.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 263.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 262.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 260.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 259.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 258.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 257.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 257.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 256.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 256.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 256.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 256.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 256.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 255.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 255.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 254.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 254.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 254.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 253.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 251.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 250.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 250.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 249.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 249.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 247.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 247.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 247.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 246.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 246.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 245.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 245.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 244.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 243.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 242.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 241.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 240.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 240.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 240.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 239.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 238.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 236.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 235.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 235.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 235.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 234.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 234.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 233.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 233.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 232.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 232.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 232.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 232.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 232.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 231.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 231.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 229.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 228.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 228.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 227.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 227.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 227.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 227.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 226.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 225.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 225.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 225.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 225.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 222.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 221.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 221.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 221.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 221.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 220.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 220.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 220.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 220.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 217.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 217.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 217.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 216.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 216.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 215.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 215.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 215.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 214.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 212.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 212.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 211.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 210.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 210.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 209.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 208.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 208.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 208.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 207.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 206.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 206.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 204.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 204.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 203.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 203.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 203.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 202.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 201.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 200.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 200.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 200.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 199.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 199.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 196.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 194.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 192.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 192.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 192.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 191.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 191.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 190.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 190.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 190.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 190.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 190.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 190.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 189.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 189.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 188.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 188.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 188.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 187.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 187.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 186.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 186.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 186.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 185.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 185.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 184.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 184.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 182.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 179.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 177.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 177.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 176.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 173.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 173.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 173.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 172.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 170.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 169.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 168.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 167.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 163.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 161.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 158.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 157.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 156.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 155.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 154.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 153.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 146.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 171.2
Samples: 4

Max nTPM: 247.8
Min nTPM: 133.5
Sample A Female 247.8
Sample B Female 164.0
Sample C Male 133.5
Sample D Male 139.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

392.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 392.9
Samples: 4

Max nTPM: 449.5
Min nTPM: 365.0
Sample A Male 385.6
Sample B Male 449.5
Sample C Female 371.5
Sample D Female 365.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.4
69735001 Antisense, RP_050503_01_H04, Mouse strain C57BL/6J (56 days, male) 9.4
73520984 Antisense, RP_051101_02_G03, Mouse strain C57BL/6J (56 days, male) 7.3

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