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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
398.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 306.0
2666
Male, age 74, left hemisphere
398.0
1827
Male, age 72, unknown
373.4
2411
Female, age 72, unknown
335.5
2019
Male, age 18, unknown
316.8
2219
Male, age 76, both hemispheres
307.7
2586
Male, age 75, left hemisphere
287.5
2828
Female, age 72, unknown
275.0
1870
Female, age 42, unknown
274.1
1833
Male, age 53, unknown
254.4
1830
Male, age 51, unknown
237.6
Dorsal raphe nucleus nTPM: 323.6
2298
Female, age 72, unknown
403.6
2047
Male, age 72, unknown
364.2
1828
Male, age 53, unknown
329.6
2750
Male, age 76, both hemispheres
325.6
2016
Female, age 72, unknown
194.7
Inferior colliculus nTPM: 276.1
2097
Female, age 72, unknown
340.0
1848
Female, age 42, unknown
281.9
2849
Male, age 72, unknown
242.1
1890
Male, age 53, unknown
240.3
Median raphe nucleus nTPM: 385.7
2220
Male, age 76, midline
385.7
Periaquaductal grey, anterior nTPM: 341.6
1947
Male, age 18, unknown
383.8
1795
Male, age 51, unknown
347.4
2502
Female, age 75, unknown
293.5
Periaquaductal grey, dorsal nTPM: 237.0
1840
Male, age 53, unknown
264.5
1831
Male, age 72, unknown
244.6
2464
Female, age 72, unknown
220.9
2850
Male, age 76, both hemispheres
218.0
Periaquaductal grey, lateral nTPM: 215.7
2053
Male, age 18, unknown
237.7
2272
Male, age 74, both hemispheres
214.6
2140
Male, age 76, both hemispheres
194.8
Pretectal area nTPM: 335.8
1816
Male, age 51, unknown
488.4
1944
Female, age 72, unknown
474.0
2007
Male, age 72, unknown
459.0
1817
Female, age 42, unknown
435.8
1815
Male, age 53, unknown
360.1
2224
Female, age 72, unknown
305.5
2667
Female, age 75, unknown
275.0
2825
Male, age 18, unknown
256.2
2407
Male, age 75, both hemispheres
243.3
2316
Male, age 76, right hemisphere
207.9
2273
Male, age 74, both hemispheres
188.7
Red nucleus nTPM: 252.9
1821
Female, age 72, unknown
329.3
2725
Female, age 75, unknown
303.5
2584
Male, age 75, left hemisphere
292.0
2785
Male, age 18, unknown
277.0
2588
Male, age 74, left hemisphere
271.9
1954
Female, age 42, unknown
254.0
2823
Male, age 76, right hemisphere
223.6
2227
Male, age 72, unknown
218.3
2769
Male, age 72, unknown
217.7
1865
Male, age 51, unknown
217.3
1904
Male, age 53, unknown
216.2
2503
Female, age 72, unknown
214.3
Substantia nigra nTPM: 398.8
1916
Female, age 42, unknown
557.0
1941
Male, age 53, unknown
537.0
1889
Female, age 72, unknown
441.4
1851
Male, age 51, unknown
428.9
2241
Male, age 72, unknown
413.0
2665
Male, age 74, both hemispheres
380.8
2409
Female, age 72, unknown
373.4
2590
Female, age 75, unknown
288.3
2699
Male, age 18, unknown
288.1
2583
Male, age 75, right hemisphere
280.4
Superior colliculus nTPM: 289.7
2668
Female, age 75, unknown
417.3
2087
Female, age 72, unknown
382.9
1796
Male, age 53, unknown
324.2
2261
Male, age 18, unknown
324.1
1895
Male, age 76, right hemisphere
316.0
1839
Male, age 51, unknown
266.4
2587
Male, age 74, left hemisphere
236.8
2664
Male, age 75, both hemispheres
228.9
1913
Female, age 42, unknown
216.7
1995
Male, age 72, unknown
183.4
Ventral tegmental area nTPM: 338.2
2218
Male, age 76, both hemispheres
421.3
2410
Female, age 72, unknown
421.1
1915
Female, age 42, unknown
390.2
1942
Male, age 51, unknown
293.4
2223
Female, age 72, unknown
260.5
2021
Male, age 53, unknown
242.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
147.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 147.2
Samples: 183
Max nTPM: 736.5
Min nTPM: 36.5
Std nTPM: 111.0
Median nTPM: 105.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
736.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
685.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
487.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
476.9
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
418.3
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
403.1
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
402.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
385.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
376.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
360.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
349.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
336.6
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
331.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
301.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
297.3
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
296.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
292.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
292.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
289.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
284.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
275.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
273.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
267.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
266.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
262.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
260.3
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
258.2
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
257.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
251.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
250.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
233.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
232.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
227.3
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
227.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
224.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
221.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
221.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
217.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
211.8
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
208.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
206.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
203.9
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
203.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
200.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
196.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
184.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
181.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
176.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
176.3
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
173.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
172.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
170.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
169.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
166.3
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
166.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
159.4
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
158.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
158.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
158.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
156.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
156.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
154.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
154.2
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
154.2
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
152.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
152.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
150.3
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
149.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
148.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
146.0
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
144.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
143.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
142.4
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
141.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
133.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
130.6
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
130.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
129.5
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
128.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
124.1
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
123.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
122.8
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
119.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
112.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
112.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
110.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
110.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
109.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
109.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
107.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
106.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
105.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
102.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
102.0
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
101.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
101.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
100.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
98.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
97.6
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
96.7
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
95.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
94.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
92.2
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
92.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
90.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
90.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
89.9
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
89.0
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
88.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
88.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
87.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
87.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
87.3
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
87.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
87.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
86.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
86.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
85.4
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
84.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
82.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
81.3
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
80.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
80.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
79.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
77.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
77.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
77.1
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
77.0
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
76.9
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
75.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
74.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
73.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
72.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
70.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
70.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
70.6
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
70.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
70.1
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
69.7
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
68.8
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
68.7
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
68.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
67.7
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
67.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
67.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
65.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
65.2
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
64.9
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
64.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
64.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
64.0
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
64.0
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
63.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
63.4
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
63.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
62.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
61.9
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
61.3
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
60.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
59.4
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
59.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
58.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
58.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
57.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
56.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
56.1
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
55.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
55.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
52.9
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
52.6
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
52.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
52.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
51.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
51.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
51.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
49.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
46.1
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
44.3
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
44.1
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
43.4
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
39.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
37.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
36.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
344.0
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 295.3
Samples: 4
Max nTPM: 444.4
Min nTPM: 117.5
Sample A
Female
444.4
Sample B
Female
210.9
Sample C
Male
408.4
Sample D
Male
117.5
Midbrain nTPM: 324.0
Samples: 4
Max nTPM: 552.4
Min nTPM: 139.5
Sample A
Female
139.5
Sample B
Female
233.8
Sample C
Male
552.4
Sample D
Male
370.1
Periaqueductal gray nTPM: 237.5
Samples: 3
Max nTPM: 307.9
Min nTPM: 194.8
Sample B
Female
209.9
Sample C
Male
307.9
Sample D
Male
194.8
Superior colliculi nTPM: 344.0
Samples: 4
Max nTPM: 527.2
Min nTPM: 165.3
Sample A
Female
362.8
Sample B
Female
165.3
Sample C
Male
527.2
Sample D
Male
320.8
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
444.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 444.8
Samples: 4
Max nTPM: 452.1
Min nTPM: 434.0
Sample A
Male
434.0
Sample B
Male
444.4
Sample C
Female
448.7
Sample D
Female
452.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.