HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:127.6 nTPM
HPA Brain:83.1 nTPM
GTEx:127.6 nTPM
FANTOM5:53.5 Scaled Tags Per Million
Mouse:123.9 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052398
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 83.1
Sample id Sample description nTPM
Hippocampus
nTPM: 78.1
1898 Male, age 80, left hemisphere 95.5
2621 Female, age 67, right hemisphere 90.1
1855 Male, age 76, left hemisphere 82.8
2529 Female, age 94, left hemisphere 74.3
1911 Female, age 85, right hemisphere 69.0
2148 Female, age 91, left hemisphere 56.8
Dentate gyrus
nTPM: 78.6
2530 Female, age 94, left hemisphere 102.3
2010 Male, age 76, both hemispheres 92.9
2246 Female, age 85, both hemispheres 73.6
2528 Male, age 74, both hemispheres 73.6
1927 Female, age 91, both hemispheres 73.4
2531 Female, age 67, both hemispheres 55.4
Entorhinal gyrus
nTPM: 77.6
2613 Female, age 94, left hemisphere 89.3
1787 Male, age 76, left hemisphere 84.5
2764 Male, age 80, right hemisphere 84.1
1938 Female, age 85, left hemisphere 79.9
2117 Female, age 91, right hemisphere 67.4
2686 Male, age 75, right hemisphere 60.3
Hippocampus, CA1
nTPM: 83.1
2749 Male, age 80, left hemisphere 120.1
1873 Female, age 85, both hemispheres 88.0
2527 Male, age 74, both hemispheres 77.8
2045 Male, age 76, both hemispheres 73.5
2082 Female, age 91, right hemisphere 55.8
Hippocampus, CA2
nTPM: 81.4
1892 Male, age 76, both hemispheres 109.6
2437 Female, age 94, left hemisphere 88.1
1963 Male, age 80, left hemisphere 87.1
2249 Male, age 74, both hemispheres 80.2
1940 Female, age 85, left hemisphere 66.8
2113 Female, age 91, right hemisphere 56.5
Hippocampus, CA3
nTPM: 76.3
1867 Male, age 76, both hemispheres 95.6
2137 Male, age 80, left hemisphere 86.9
2436 Male, age 74, both hemispheres 82.8
1891 Female, age 85, both hemispheres 73.9
2861 Female, age 67, both hemispheres 59.8
2620 Female, age 94, left hemisphere 58.6
Parahippocampal cortex
nTPM: 76.6
2245 Female, age 91, both hemispheres 84.6
2532 Female, age 72, left hemisphere 82.4
1850 Male, age 80, both hemispheres 81.2
2250 Female, age 67, right hemisphere 80.8
2018 Male, age 76, both hemispheres 75.2
2692 Male, age 74, both hemispheres 74.7
1933 Female, age 85, both hemispheres 74.5
2622 Female, age 67, right hemisphere 72.9
1990 Female, age 91, right hemisphere 70.3
2693 Female, age 94, both hemispheres 69.5
Perirhinal gyrus
nTPM: 79.4
1847 Female, age 91, left hemisphere 92.1
1841 Female, age 85, right hemisphere 86.7
1794 Male, age 80, right hemisphere 74.7
2521 Female, age 94, right hemisphere 73.2
2848 Male, age 76, right hemisphere 70.5
Subiculum
nTPM: 82.6
2438 Female, age 94, left hemisphere 106.1
2619 Male, age 74, both hemispheres 89.1
1901 Male, age 80, both hemispheres 85.4
2042 Male, age 76, both hemispheres 81.8
1977 Female, age 85, both hemispheres 78.3
2729 Female, age 91, right hemisphere 54.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 127.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.6
Samples: 255

Max nTPM: 261.2
Min nTPM: 62.7
Std nTPM: 36.8
Median nTPM: 121.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 261.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 248.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 236.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 227.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 227.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 223.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 212.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 207.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 207.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 204.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 203.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 53.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.5
FF:10169-103B7 60 years, female 57.1
FF:10153-102I9 76 years, female 49.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 123.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 113.3
Samples: 4

Max nTPM: 117.7
Min nTPM: 107.6
Sample A Male 107.6
Sample B Male 111.6
Sample C Female 117.7
Sample D Female 116.1
Hippocampal formation
nTPM: 123.9
Samples: 4

Max nTPM: 140.4
Min nTPM: 114.6
Sample A Male 140.4
Sample B Male 120.8
Sample C Female 114.6
Sample D Female 119.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70192039 Antisense, RP_050517_01_B04, Mouse strain C57BL/6J (56 days, male) 0.2
71670701 Antisense, RP_050517_01_B04, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo