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  • SUMMARY

  • TISSUE

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  • TRAPPC1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:129.8 nTPM
HPA Brain:105.8 nTPM
GTEx:129.8 nTPM
Mouse:93.8 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 84.1
2226 Male, age 75, left hemisphere 111.1
1961 Female, age 42, unknown 57.0
Dorsomedial nucleus
nTPM: 71.7
1989 Male, age 62, unknown 99.1
2041 Female, age 72, unknown 64.1
2017 Female, age 42, unknown 51.9
Lateral hypothalamic area
nTPM: 105.8
2271 Male, age 75, both hemispheres 122.2
1791 Male, age 80, right hemisphere 117.0
2228 Male, age 66, unknown 105.6
2412 Male, age 62, unknown 78.5
Mammillary body
nTPM: 100.7
1923 Female, age 72, unknown 130.7
2413 Male, age 66, unknown 111.5
1948 Female, age 72, unknown 96.7
1834 Female, age 42, unknown 90.5
1945 Male, age 80, right hemisphere 74.3
Paraventricular nucleus
nTPM: 79.4
2700 Male, age 62, unknown 79.4
Preoptic area
nTPM: 75.4
2414 Female, age 72, unknown 81.5
1861 Female, age 42, unknown 74.4
1907 Male, age 80, right hemisphere 70.3
Supraoptic nucleus
nTPM: 92.4
2835 Female, age 72, unknown 119.3
1894 Female, age 72, unknown 83.0
2043 Male, age 62, unknown 75.0
Ventromedial nucleus
nTPM: 58.3
1982 Female, age 72, unknown 61.0
1822 Female, age 42, unknown 55.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 129.8
Samples: 257

Max nTPM: 301.7
Min nTPM: 70.6
Std nTPM: 33.0
Median nTPM: 125.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 301.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 267.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 252.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 216.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 214.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 210.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 205.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 200.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 194.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 193.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 191.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 190.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 190.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 186.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 181.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 178.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 178.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 178.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 174.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 173.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 173.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 171.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 171.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 170.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 169.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 169.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 167.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 167.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 166.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 165.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 164.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 164.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 164.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 163.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 163.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 163.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 163.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 162.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 161.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 161.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 160.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 160.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 159.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 158.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 158.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 155.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 155.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 155.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 154.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 154.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 153.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 153.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 152.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 152.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 152.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 152.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 151.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 151.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 151.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 150.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 150.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 149.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 149.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 148.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 148.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 147.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 147.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 146.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 145.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 144.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 144.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 144.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 144.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 143.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 143.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 143.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 142.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 142.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 141.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 141.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 141.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 140.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 140.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 140.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 140.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 139.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 139.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 138.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 138.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 138.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 138.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 138.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 138.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 137.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 137.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 136.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 136.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 136.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 136.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 136.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 134.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 134.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 134.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 133.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 133.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 132.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 132.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 132.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 131.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 131.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 131.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 131.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 130.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 130.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 130.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 130.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 130.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 130.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 129.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 128.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 128.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 128.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 128.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 128.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 127.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 127.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 127.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 126.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 125.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 125.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 124.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 123.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 123.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 122.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 122.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 122.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 122.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 122.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 121.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 121.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 121.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 120.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 120.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 119.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 119.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 119.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 119.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 118.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 118.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 118.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 118.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 118.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 118.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 117.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 116.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 116.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 116.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 116.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 116.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 116.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 116.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 116.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 115.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 115.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 114.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 114.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 113.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 113.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 113.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 112.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 112.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 111.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 111.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 111.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 111.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 111.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 111.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 111.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 111.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 110.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 110.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 110.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 110.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 110.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 110.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 110.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 109.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 109.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 109.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 109.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 108.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 107.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 106.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 106.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 106.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 106.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 105.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 105.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 105.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 105.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 103.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 103.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 103.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 103.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 102.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 102.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 102.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 101.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 101.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 101.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 100.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 100.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 99.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 99.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 98.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 97.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 97.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 96.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 96.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 96.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 95.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 95.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 95.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 95.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 94.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 94.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 94.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 94.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 93.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 92.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 92.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 92.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 92.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 90.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 90.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 90.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 90.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 90.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 90.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 89.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 88.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 87.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 87.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 87.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 86.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 86.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 86.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 85.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 85.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 84.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 83.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 80.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 77.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 75.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 74.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 72.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 70.6
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 93.9
Samples: 4

Max nTPM: 100.6
Min nTPM: 81.1
Sample A Male 81.1
Sample B Male 99.5
Sample C Female 100.6
Sample D Female 94.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
70192039 Antisense, RP_050517_01_B04, Mouse strain C57BL/6J (56 days, male) 0.0
71670701 Antisense, RP_050517_01_B04, Mouse strain C57BL/6J (56 days, male) 0.0

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