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  • SUMMARY

  • TISSUE

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  • ACYP2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:76.1 nTPM
HPA Brain:70.8 nTPM
GTEx:76.1 nTPM
Pig:37.9 nTPM
Mouse:48.6 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 51.1
2226 Male, age 75, left hemisphere 57.1
1961 Female, age 42, unknown 45.1
Dorsomedial nucleus
nTPM: 51.9
1989 Male, age 62, unknown 55.5
2041 Female, age 72, unknown 53.2
2017 Female, age 42, unknown 46.9
Lateral hypothalamic area
nTPM: 54.4
2271 Male, age 75, both hemispheres 59.3
1791 Male, age 80, right hemisphere 59.0
2228 Male, age 66, unknown 50.0
2412 Male, age 62, unknown 49.4
Mammillary body
nTPM: 70.8
1923 Female, age 72, unknown 88.2
1834 Female, age 42, unknown 73.3
1948 Female, age 72, unknown 67.8
1945 Male, age 80, right hemisphere 65.8
2413 Male, age 66, unknown 59.1
Paraventricular nucleus
nTPM: 47.2
2700 Male, age 62, unknown 47.2
Preoptic area
nTPM: 53.8
2414 Female, age 72, unknown 55.7
1861 Female, age 42, unknown 54.8
1907 Male, age 80, right hemisphere 50.8
Supraoptic nucleus
nTPM: 62.5
1894 Female, age 72, unknown 69.2
2043 Male, age 62, unknown 67.4
2835 Female, age 72, unknown 51.1
Ventromedial nucleus
nTPM: 46.6
1982 Female, age 72, unknown 48.0
1822 Female, age 42, unknown 45.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 76.1
Samples: 257

Max nTPM: 220.8
Min nTPM: 39.3
Std nTPM: 20.9
Median nTPM: 73.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 220.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 185.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 142.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 142.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 135.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 132.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 127.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 125.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 125.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 125.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 123.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 114.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 112.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 109.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 107.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 106.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 105.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 103.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 101.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 99.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 99.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 98.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 98.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 97.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 97.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 97.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 97.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 96.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 96.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 94.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 94.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 94.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 94.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 93.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 93.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 93.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 93.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 92.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 92.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 91.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 91.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 91.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 90.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 90.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 90.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 88.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 88.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 87.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 87.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 87.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 86.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 86.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 86.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 86.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 85.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 85.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 85.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 85.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 84.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 84.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 84.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 83.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 83.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 82.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 82.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 82.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 82.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 82.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 82.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 81.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 81.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 81.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 81.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 81.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 81.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 81.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 80.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 80.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 80.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 80.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 80.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 80.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 79.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 79.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 79.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 79.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 79.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 78.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 78.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 78.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 78.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 77.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 77.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 77.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 77.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 77.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 77.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 76.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 76.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 76.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 76.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 76.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 76.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 76.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 76.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 75.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 75.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 75.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 75.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 75.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 75.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 75.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 75.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 74.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 74.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 74.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 74.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 74.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 74.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 74.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 74.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 74.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 73.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 73.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 73.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 73.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 73.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 73.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 73.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 73.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 73.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 72.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 72.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 72.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 72.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 72.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 72.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 72.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 72.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 72.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 71.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 71.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 71.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 71.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 71.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 70.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 70.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 70.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 70.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 70.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 70.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 69.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 69.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 69.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 69.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 68.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 68.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 68.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 68.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 67.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 67.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 67.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 67.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 67.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 66.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 66.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 66.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 66.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 66.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 66.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 66.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 66.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 66.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 66.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 65.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 65.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 65.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 65.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 65.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 65.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 65.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 64.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 64.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 64.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 64.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 64.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 64.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 64.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 64.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 64.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 63.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 63.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 63.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 63.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 63.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 63.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 62.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 62.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 62.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 61.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 61.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 61.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 61.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 60.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 60.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 60.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 60.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 59.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 59.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 59.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 59.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 59.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 59.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 59.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 58.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 58.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 58.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 58.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 58.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 58.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 57.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 57.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 57.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 57.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 57.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 57.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 57.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 57.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 56.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 56.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 56.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 56.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 56.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 56.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 55.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 55.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 55.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 54.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 53.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 53.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 53.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 52.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 51.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 51.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 50.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 50.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 50.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 50.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 49.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 49.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 49.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 46.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 44.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 44.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 39.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 39.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 38.0
Samples: 4

Max nTPM: 43.1
Min nTPM: 29.9
Sample A Female 42.7
Sample B Female 43.1
Sample C Male 36.1
Sample D Male 29.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 48.6
Samples: 4

Max nTPM: 54.6
Min nTPM: 45.3
Sample A Male 47.4
Sample B Male 54.6
Sample C Female 47.1
Sample D Female 45.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
70303534 Antisense, RP_050609_01_F12, Mouse strain C57BL/6J (56 days, male) 0.4
73930820 Antisense, RP_051214_04_C04, Mouse strain C57BL/6J (56 days, male) 0.1

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