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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPS9
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:12.2 nTPM
GTEx:784.3 nTPM
FANTOM5:102.5 Scaled Tags Per Million
Macaque:100.9 nTPM
Pig:289.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.2
Sample id Sample description nTPM
Putamen
nTPM: 12.2
2466 Female, age 79, unknown 28.5
1838 Male, age 80, right hemisphere 17.0
1829 Male, age 74, unknown 11.4
2482 Female, age 94, left hemisphere 9.0
2647 Male, age 75, left hemisphere 8.3
2489 Female, age 72, unknown 7.2
1937 Female, age 91, right hemisphere 3.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

784.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 784.3
Samples: 254

Max nTPM: 1962.7
Min nTPM: 320.6
Std nTPM: 257.6
Median nTPM: 746.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1962.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1795.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1748.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1640.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1589.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1544.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1500.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1428.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1412.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1399.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1296.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1278.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1270.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1239.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1238.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1220.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1215.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1208.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1199.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1184.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1182.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1173.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1139.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1139.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1136.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1128.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1119.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1118.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1104.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1078.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1075.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1066.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1061.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1052.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1044.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1031.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1018.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1007.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1003.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 997.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 996.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 988.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 978.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 972.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 971.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 963.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 953.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 952.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 947.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 934.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 934.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 931.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 926.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 923.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 923.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 921.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 916.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 916.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 915.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 910.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 908.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 905.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 902.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 898.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 888.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 885.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 879.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 877.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 852.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 850.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 848.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 845.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 836.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 836.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 834.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 834.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 833.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 832.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 827.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 827.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 826.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 819.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 818.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 817.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 811.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 811.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 810.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 806.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 802.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 801.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 800.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 798.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 797.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 796.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 796.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 794.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 792.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 792.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 791.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 789.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 789.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 788.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 787.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 787.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 784.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 783.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 776.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 775.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 772.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 768.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 767.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 766.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 765.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 761.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 761.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 761.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 761.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 757.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 756.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 754.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 752.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 752.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 751.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 749.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 748.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 747.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 746.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 745.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 743.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 737.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 726.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 726.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 722.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 722.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 721.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 720.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 718.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 717.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 715.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 715.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 715.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 713.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 713.1
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 712.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 711.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 708.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 708.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 707.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 705.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 701.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 697.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 694.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 692.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 692.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 686.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 681.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 681.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 681.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 678.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 672.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 670.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 669.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 668.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 661.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 661.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 659.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 655.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 649.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 644.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 643.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 643.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 642.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 641.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 641.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 637.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 636.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 636.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 633.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 632.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 631.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 628.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 628.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 624.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 621.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 620.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 619.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 619.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 613.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 610.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 610.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 609.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 608.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 606.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 605.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 601.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 600.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 599.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 592.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 591.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 589.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 587.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 586.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 586.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 579.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 579.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 578.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 565.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 564.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 563.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 560.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 555.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 554.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 551.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 549.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 544.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 541.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 540.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 539.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 539.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 538.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 538.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 535.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 534.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 531.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 531.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 530.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 525.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 525.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 525.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 523.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 522.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 522.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 521.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 519.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 518.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 513.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 508.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 506.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 505.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 504.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 494.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 489.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 478.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 461.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 459.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 457.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 449.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 443.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 434.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 428.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 424.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 402.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 376.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 320.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

102.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 102.5
FF:10176-103C5 60 years, female 102.5

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.9
Macaque sample Sample description nTPM
Putamen
nTPM: 100.9
Samples: 2

Max nTPM: 107.1
Min nTPM: 94.7
Sample A 94.7
Sample B 107.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

289.8
Pig sample Sample description nTPM
Putamen
nTPM: 289.8
Samples: 3

Max nTPM: 335.5
Min nTPM: 228.1
Sample B Female 228.1
Sample C Male 335.5
Sample D Male 305.8

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