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  • SUMMARY

  • TISSUE

  • BRAIN

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  • CDK5R2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:29.0 nTPM
HPA Brain:87.3 nTPM
GTEx:29.0 nTPM
Pig:50.8 nTPM
Mouse:28.8 nTPM
Allen mouse:7.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 87.3
2226 Male, age 75, left hemisphere 128.5
1961 Female, age 42, unknown 46.1
Dorsomedial nucleus
nTPM: 50.1
1989 Male, age 62, unknown 82.0
2041 Female, age 72, unknown 35.1
2017 Female, age 42, unknown 33.3
Lateral hypothalamic area
nTPM: 77.8
2271 Male, age 75, both hemispheres 91.2
2228 Male, age 66, unknown 88.3
1791 Male, age 80, right hemisphere 74.2
2412 Male, age 62, unknown 57.5
Mammillary body
nTPM: 36.7
2413 Male, age 66, unknown 53.3
1923 Female, age 72, unknown 46.2
1945 Male, age 80, right hemisphere 29.3
1948 Female, age 72, unknown 28.2
1834 Female, age 42, unknown 26.7
Paraventricular nucleus
nTPM: 34.5
2700 Male, age 62, unknown 34.5
Preoptic area
nTPM: 43.5
1907 Male, age 80, right hemisphere 64.4
1861 Female, age 42, unknown 35.5
2414 Female, age 72, unknown 30.5
Supraoptic nucleus
nTPM: 31.6
2835 Female, age 72, unknown 48.5
2043 Male, age 62, unknown 23.8
1894 Female, age 72, unknown 22.5
Ventromedial nucleus
nTPM: 42.0
1982 Female, age 72, unknown 44.9
1822 Female, age 42, unknown 39.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 29.0
Samples: 257

Max nTPM: 74.3
Min nTPM: 1.1
Std nTPM: 14.0
Median nTPM: 29.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 74.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 70.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 70.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 69.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 66.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 64.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 63.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 61.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 54.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 54.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 53.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 52.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 51.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 50.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 50.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 50.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 48.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 47.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 47.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 47.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 45.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 45.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 45.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 45.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 45.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 44.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 44.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 44.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 44.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 44.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 44.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 43.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 43.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 43.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 42.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 42.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 42.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 42.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 42.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 42.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 42.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 42.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 41.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 41.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 41.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 41.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 41.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 40.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 40.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 40.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 40.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 39.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 39.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 39.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 39.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 39.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 39.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 39.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 38.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 38.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 38.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 38.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 38.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 38.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 38.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 38.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 38.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 37.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 37.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 37.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 37.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 37.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 37.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 37.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 36.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 36.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 36.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 36.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 36.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 35.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 35.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 35.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 35.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 35.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 35.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 35.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 35.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 34.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 34.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 34.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 34.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 33.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 33.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 33.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 33.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 33.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 33.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 33.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 33.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 33.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 32.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 32.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 32.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 32.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 32.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 32.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 32.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 32.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 32.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 32.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 32.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 32.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 32.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 32.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 32.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 31.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 31.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 31.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 31.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 30.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 30.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 30.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 30.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 30.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 30.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 30.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 30.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 29.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 29.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 29.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 29.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 29.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 29.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 29.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 28.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 28.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 28.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 27.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 27.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 27.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 27.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 27.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 27.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 27.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 27.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 26.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 26.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 26.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 26.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 26.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 26.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 24.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 24.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 23.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 23.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 23.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 23.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 23.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 23.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 22.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 22.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 22.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 22.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 22.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 22.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 22.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 21.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 21.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 21.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 21.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 21.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 21.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 21.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 20.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 20.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 20.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 20.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 20.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 20.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 20.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 20.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 20.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 19.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 19.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 19.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 19.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 19.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 19.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 19.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 19.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 19.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 19.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 18.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 18.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 18.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 18.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 18.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 17.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 17.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 17.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 17.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 16.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 16.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 15.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 15.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 15.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 15.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 15.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 15.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 14.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 14.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 14.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 14.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 14.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 13.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 13.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 13.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 13.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 13.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 13.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 13.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 13.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 13.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 12.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 12.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 11.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 11.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 11.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 10.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 10.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 10.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 10.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 10.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 10.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 9.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 8.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 8.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 8.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 8.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 7.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 7.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 7.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 6.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 6.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 6.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 6.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 5.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 5.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 5.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 4.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 4.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 3.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 2.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 2.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 50.8
Samples: 4

Max nTPM: 72.5
Min nTPM: 39.3
Sample A Female 72.5
Sample B Female 45.8
Sample C Male 45.5
Sample D Male 39.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 28.8
Samples: 4

Max nTPM: 31.5
Min nTPM: 26.1
Sample A Male 26.1
Sample B Male 31.5
Sample C Female 30.6
Sample D Female 26.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.8
70812811 Antisense, RP_050712_02_F07, Mouse strain C57BL/6J (56 days, male) 7.8

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