HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:222.7 nTPM
HPA Brain:383.1 nTPM
GTEx:222.7 nTPM
FANTOM5:834.5 Scaled Tags Per Million
Pig:363.4 nTPM
Mouse:908.7 nTPM
Allen mouse:18.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042754Antibody HPA043398
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 383.1
Sample id Sample description nTPM
Hippocampus
nTPM: 268.6
1898 Male, age 80, left hemisphere 344.0
1911 Female, age 85, right hemisphere 275.9
1855 Male, age 76, left hemisphere 271.9
2621 Female, age 67, right hemisphere 255.3
2148 Female, age 91, left hemisphere 233.9
2529 Female, age 94, left hemisphere 230.6
Dentate gyrus
nTPM: 270.7
1927 Female, age 91, both hemispheres 346.5
2010 Male, age 76, both hemispheres 295.1
2246 Female, age 85, both hemispheres 289.8
2528 Male, age 74, both hemispheres 279.7
2530 Female, age 94, left hemisphere 209.3
2531 Female, age 67, both hemispheres 203.7
Entorhinal gyrus
nTPM: 281.1
1938 Female, age 85, left hemisphere 350.9
2764 Male, age 80, right hemisphere 318.9
1787 Male, age 76, left hemisphere 298.3
2117 Female, age 91, right hemisphere 275.6
2613 Female, age 94, left hemisphere 269.6
2686 Male, age 75, right hemisphere 173.6
Hippocampus, CA1
nTPM: 317.7
2749 Male, age 80, left hemisphere 461.1
1873 Female, age 85, both hemispheres 305.2
2527 Male, age 74, both hemispheres 299.3
2045 Male, age 76, both hemispheres 272.2
2082 Female, age 91, right hemisphere 250.7
Hippocampus, CA2
nTPM: 291.8
1892 Male, age 76, both hemispheres 371.1
2249 Male, age 74, both hemispheres 324.1
1963 Male, age 80, left hemisphere 310.6
1940 Female, age 85, left hemisphere 274.0
2113 Female, age 91, right hemisphere 249.6
2437 Female, age 94, left hemisphere 221.3
Hippocampus, CA3
nTPM: 327.9
2137 Male, age 80, left hemisphere 459.9
2436 Male, age 74, both hemispheres 371.6
2620 Female, age 94, left hemisphere 361.1
1867 Male, age 76, both hemispheres 318.9
1891 Female, age 85, both hemispheres 269.0
2861 Female, age 67, both hemispheres 186.7
Parahippocampal cortex
nTPM: 292.1
1850 Male, age 80, both hemispheres 396.0
1933 Female, age 85, both hemispheres 323.5
1990 Female, age 91, right hemisphere 317.6
2250 Female, age 67, right hemisphere 305.2
2693 Female, age 94, both hemispheres 290.0
2245 Female, age 91, both hemispheres 286.7
2532 Female, age 72, left hemisphere 283.9
2018 Male, age 76, both hemispheres 269.5
2692 Male, age 74, both hemispheres 248.5
2622 Female, age 67, right hemisphere 200.1
Perirhinal gyrus
nTPM: 383.1
1794 Male, age 80, right hemisphere 429.1
1847 Female, age 91, left hemisphere 396.7
1841 Female, age 85, right hemisphere 394.9
2521 Female, age 94, right hemisphere 363.7
2848 Male, age 76, right hemisphere 331.2
Subiculum
nTPM: 273.7
1977 Female, age 85, both hemispheres 328.6
1901 Male, age 80, both hemispheres 316.8
2042 Male, age 76, both hemispheres 257.3
2619 Male, age 74, both hemispheres 254.0
2729 Female, age 91, right hemisphere 246.0
2438 Female, age 94, left hemisphere 239.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 222.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 222.7
Samples: 255

Max nTPM: 543.4
Min nTPM: 71.9
Std nTPM: 62.5
Median nTPM: 213.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 543.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 538.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 409.1
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 369.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 368.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 362.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 356.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 350.1
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 338.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 332.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 325.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 834.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 834.5
FF:10169-103B7 60 years, female 935.7
FF:10153-102I9 76 years, female 733.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 363.4
Pig sample Sample description nTPM
Subiculum
nTPM: 257.9
Samples: 4

Max nTPM: 313.1
Min nTPM: 228.5
Sample A Female 313.1
Sample B Female 228.5
Sample C Male 241.1
Sample D Male 248.8
Dorsal hippocampus
nTPM: 363.5
Samples: 4

Max nTPM: 479.2
Min nTPM: 233.1
Sample A Female 479.2
Sample B Female 440.9
Sample C Male 300.6
Sample D Male 233.1
Entorhinal cortex
nTPM: 279.0
Samples: 4

Max nTPM: 310.2
Min nTPM: 251.3
Sample A Female 310.2
Sample B Female 280.0
Sample C Male 274.6
Sample D Male 251.3
Ventral hippocampus
nTPM: 309.7
Samples: 4

Max nTPM: 491.1
Min nTPM: 192.3
Sample A Female 289.1
Sample B Female 192.3
Sample C Male 266.1
Sample D Male 491.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 908.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 832.2
Samples: 4

Max nTPM: 911.4
Min nTPM: 790.2
Sample A Male 790.2
Sample B Male 790.9
Sample C Female 836.2
Sample D Female 911.4
Hippocampal formation
nTPM: 908.7
Samples: 4

Max nTPM: 959.7
Min nTPM: 812.2
Sample A Male 959.7
Sample B Male 948.0
Sample C Female 914.9
Sample D Female 812.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
1405 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 18.5
1406 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 14.5

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