HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:98.4 nTPM
HPA Brain:38.8 nTPM
GTEx:98.4 nTPM
FANTOM5:99.8 Scaled Tags Per Million
Pig:13.5 nTPM
Mouse:70.9 nTPM
Allen mouse:0.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012319
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.8
Sample id Sample description nTPM
Hippocampus
nTPM: 37.8
1898 Male, age 80, left hemisphere 46.9
2621 Female, age 67, right hemisphere 43.2
2529 Female, age 94, left hemisphere 38.6
1855 Male, age 76, left hemisphere 37.2
2148 Female, age 91, left hemisphere 36.3
1911 Female, age 85, right hemisphere 24.6
Dentate gyrus
nTPM: 37.2
2010 Male, age 76, both hemispheres 51.6
2530 Female, age 94, left hemisphere 43.7
2528 Male, age 74, both hemispheres 39.2
1927 Female, age 91, both hemispheres 33.1
2246 Female, age 85, both hemispheres 30.5
2531 Female, age 67, both hemispheres 24.9
Entorhinal gyrus
nTPM: 30.6
2764 Male, age 80, right hemisphere 38.5
1787 Male, age 76, left hemisphere 33.1
2117 Female, age 91, right hemisphere 31.9
1938 Female, age 85, left hemisphere 29.9
2686 Male, age 75, right hemisphere 25.5
2613 Female, age 94, left hemisphere 24.9
Hippocampus, CA1
nTPM: 38.8
2749 Male, age 80, left hemisphere 50.2
1873 Female, age 85, both hemispheres 41.7
2527 Male, age 74, both hemispheres 41.1
2045 Male, age 76, both hemispheres 33.2
2082 Female, age 91, right hemisphere 27.9
Hippocampus, CA2
nTPM: 38.1
1963 Male, age 80, left hemisphere 44.6
1892 Male, age 76, both hemispheres 43.2
2249 Male, age 74, both hemispheres 43.2
2437 Female, age 94, left hemisphere 38.8
2113 Female, age 91, right hemisphere 29.5
1940 Female, age 85, left hemisphere 29.2
Hippocampus, CA3
nTPM: 34.9
1867 Male, age 76, both hemispheres 38.7
2436 Male, age 74, both hemispheres 37.7
1891 Female, age 85, both hemispheres 33.6
2137 Male, age 80, left hemisphere 33.6
2620 Female, age 94, left hemisphere 32.9
2861 Female, age 67, both hemispheres 32.6
Parahippocampal cortex
nTPM: 30.8
2250 Female, age 67, right hemisphere 42.4
2018 Male, age 76, both hemispheres 35.3
2245 Female, age 91, both hemispheres 31.9
1990 Female, age 91, right hemisphere 29.9
2532 Female, age 72, left hemisphere 29.7
1850 Male, age 80, both hemispheres 29.6
1933 Female, age 85, both hemispheres 29.4
2692 Male, age 74, both hemispheres 29.3
2622 Female, age 67, right hemisphere 27.9
2693 Female, age 94, both hemispheres 22.8
Perirhinal gyrus
nTPM: 29.0
1847 Female, age 91, left hemisphere 41.1
1841 Female, age 85, right hemisphere 30.2
1794 Male, age 80, right hemisphere 25.3
2521 Female, age 94, right hemisphere 25.0
2848 Male, age 76, right hemisphere 23.3
Subiculum
nTPM: 33.5
1977 Female, age 85, both hemispheres 38.4
2619 Male, age 74, both hemispheres 36.9
2438 Female, age 94, left hemisphere 34.6
2042 Male, age 76, both hemispheres 31.7
1901 Male, age 80, both hemispheres 30.8
2729 Female, age 91, right hemisphere 28.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 98.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 98.4
Samples: 255

Max nTPM: 225.5
Min nTPM: 39.0
Std nTPM: 24.4
Median nTPM: 95.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 225.5
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 173.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 170.4
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 163.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 162.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 162.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 158.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 156.0
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 152.7
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 152.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 149.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 99.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.8
FF:10169-103B7 60 years, female 129.8
FF:10153-102I9 76 years, female 69.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.5
Pig sample Sample description nTPM
Subiculum
nTPM: 11.9
Samples: 4

Max nTPM: 17.0
Min nTPM: 8.9
Sample A Female 17.0
Sample B Female 10.6
Sample C Male 8.9
Sample D Male 10.9
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 18.0
Min nTPM: 9.7
Sample A Female 18.0
Sample B Female 12.3
Sample C Male 13.7
Sample D Male 9.7
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 13.2
Min nTPM: 7.5
Sample A Female 10.2
Sample B Female 13.2
Sample C Male 12.1
Sample D Male 7.5
Ventral hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.2
Sample A Female 12.1
Sample B Female 11.2
Sample C Male 16.2
Sample D Male 14.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 70.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.6
Samples: 4

Max nTPM: 70.3
Min nTPM: 48.0
Sample A Male 63.0
Sample B Male 70.3
Sample C Female 61.2
Sample D Female 48.0
Hippocampal formation
nTPM: 70.9
Samples: 4

Max nTPM: 77.3
Min nTPM: 58.7
Sample A Male 72.4
Sample B Male 75.2
Sample C Female 58.7
Sample D Female 77.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71020801 Antisense, RP_050505_01_G08, Mouse strain C57BL/6J (56 days, male) 0.3

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