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  • MRPL52
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:98.2 nTPM
HPA Brain:47.5 nTPM
GTEx:98.2 nTPM
FANTOM5:114.1 Scaled Tags Per Million
Pig:19.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.5
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 46.5
1981 Female, age 72, midline 57.5
2194 Female, age 79, both hemispheres 47.9
2048 Male, age 55, midline 43.7
2816 Male, age 47, midline 42.5
2565 Male, age 75, midline 41.1
Cervical spinal cord, dorsal horn
nTPM: 43.6
2296 Male, age 66, both hemispheres 59.5
2173 Female, age 72, unknown 53.5
2069 Male, age 47, both hemispheres 44.7
2297 Male, age 75, both hemispheres 37.4
1877 Male, age 55, unknown 34.4
2721 Male, age 90, both hemispheres 32.2
Cervical spinal cord, ventral horn
nTPM: 47.5
2098 Female, age 72, unknown 53.7
2809 Male, age 90, both hemispheres 53.6
2480 Male, age 75, both hemispheres 51.2
2068 Male, age 55, unknown 50.5
2820 Female, age 79, both hemispheres 42.2
2295 Male, age 66, both hemispheres 33.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 98.2
Samples: 204

Max nTPM: 186.8
Min nTPM: 49.8
Std nTPM: 23.5
Median nTPM: 93.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 186.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 170.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 170.2
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 162.4
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 160.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 156.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 155.6
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 154.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 150.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 150.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 142.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 141.6
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 139.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 137.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 136.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 131.5
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 131.5
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 128.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 128.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 128.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 127.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 126.9
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 125.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 125.1
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 125.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 123.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 122.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 120.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 120.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 120.0
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 119.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 119.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 118.4
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 117.9
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 117.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 117.0
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 115.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 115.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 115.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 114.5
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 114.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 113.6
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 113.2
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 112.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 112.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 112.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 111.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 111.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 111.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 111.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 110.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 110.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 110.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 110.4
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 110.1
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 109.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 109.0
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 109.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 108.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 108.5
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 108.3
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 107.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 107.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 106.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 106.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 106.5
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 105.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 104.6
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 104.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 103.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 103.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 102.7
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 102.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 102.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 101.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 101.1
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 101.0
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 100.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 100.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 100.7
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 100.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 100.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 99.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 99.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 99.2
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 98.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 98.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 98.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 98.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 97.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 97.2
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 96.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 96.7
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 96.4
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 96.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 95.8
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 95.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 95.3
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 95.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 94.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 94.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 93.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 93.5
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 93.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 93.1
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 93.1
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 92.8
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 92.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 92.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 92.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 92.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 92.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 92.0
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 91.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 91.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 91.6
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 91.1
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 91.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 90.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 90.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 90.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 90.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 90.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 90.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 90.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 89.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 89.4
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 89.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 89.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 89.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 88.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 88.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 88.4
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 88.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 87.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 87.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 87.4
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 87.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 87.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 87.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 87.0
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 86.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 86.5
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 86.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 85.2
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 85.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 84.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 84.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 83.9
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 83.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 83.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 83.5
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 83.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 83.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 83.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 83.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 82.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 82.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 81.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 81.9
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 81.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 81.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 80.3
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 80.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 79.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 79.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 79.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 78.7
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 78.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 77.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 77.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 77.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 77.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 77.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 76.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 76.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 76.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 75.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 75.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 74.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 74.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 74.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 73.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 72.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 70.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 69.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 69.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 67.6
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 67.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 67.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 66.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 65.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 64.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 64.9
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 64.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 63.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 63.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 61.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 57.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 57.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 54.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 52.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 51.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 49.8
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

114.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 114.1
FF:10181-103D1 60 years, female 161.1
FF:10159-103A6 76 years, female 67.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 17.7
Samples: 4

Max nTPM: 21.5
Min nTPM: 14.7
Sample A Female 14.7
Sample B Female 18.1
Sample C Male 21.5
Sample D Male 16.6
Ventral spinal cord
nTPM: 19.2
Samples: 4

Max nTPM: 23.0
Min nTPM: 15.9
Sample A Female 19.1
Sample B Female 18.8
Sample C Male 23.0
Sample D Male 15.9

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