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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:68.3 nTPM
HPA Brain:78.2 nTPM
GTEx:68.3 nTPM
Pig:64.3 nTPM
Mouse:82.4 nTPM
Allen mouse:2.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 76.5
2226 Male, age 75, left hemisphere 82.0
1961 Female, age 42, unknown 71.0
Dorsomedial nucleus
nTPM: 77.1
1989 Male, age 62, unknown 78.1
2017 Female, age 42, unknown 76.9
2041 Female, age 72, unknown 76.3
Lateral hypothalamic area
nTPM: 78.2
1791 Male, age 80, right hemisphere 85.9
2271 Male, age 75, both hemispheres 84.5
2228 Male, age 66, unknown 80.3
2412 Male, age 62, unknown 62.3
Mammillary body
nTPM: 76.0
1923 Female, age 72, unknown 84.7
1945 Male, age 80, right hemisphere 76.3
2413 Male, age 66, unknown 74.7
1948 Female, age 72, unknown 73.9
1834 Female, age 42, unknown 70.2
Paraventricular nucleus
nTPM: 76.6
2700 Male, age 62, unknown 76.6
Preoptic area
nTPM: 73.2
2414 Female, age 72, unknown 76.7
1907 Male, age 80, right hemisphere 75.2
1861 Female, age 42, unknown 67.6
Supraoptic nucleus
nTPM: 73.6
1894 Female, age 72, unknown 78.4
2043 Male, age 62, unknown 77.3
2835 Female, age 72, unknown 65.0
Ventromedial nucleus
nTPM: 69.3
1982 Female, age 72, unknown 75.2
1822 Female, age 42, unknown 63.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 68.3
Samples: 257

Max nTPM: 110.9
Min nTPM: 37.8
Std nTPM: 13.2
Median nTPM: 66.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 110.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 108.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 107.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 105.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 100.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 96.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 96.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 96.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 94.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 93.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 92.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 92.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 92.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 91.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 90.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 90.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 88.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 88.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 87.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 87.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 87.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 87.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 87.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 86.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 85.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 85.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 85.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 85.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 84.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 84.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 84.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 84.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 83.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 82.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 82.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 82.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 82.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 82.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 82.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 82.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 81.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 81.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 80.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 80.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 80.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 80.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 80.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 80.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 80.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 79.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 79.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 79.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 79.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 79.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 78.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 78.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 78.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 77.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 77.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 77.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 77.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 76.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 76.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 76.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 76.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 76.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 76.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 76.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 76.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 76.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 75.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 75.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 75.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 75.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 75.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 75.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 75.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 74.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 74.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 74.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 74.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 74.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 73.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 73.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 73.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 73.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 73.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 73.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 73.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 73.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 72.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 72.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 72.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 72.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 72.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 71.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 71.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 71.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 71.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 71.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 71.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 70.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 70.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 70.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 70.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 69.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 69.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 69.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 69.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 68.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 68.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 68.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 68.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 68.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 68.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 68.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 68.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 67.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 67.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 67.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 67.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 67.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 67.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 67.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 67.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 66.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 66.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 66.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 66.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 66.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 66.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 66.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 66.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 66.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 66.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 65.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 65.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 65.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 65.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 65.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 65.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 65.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 65.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 65.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 65.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 65.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 65.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 64.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 64.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 64.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 64.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 64.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 64.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 64.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 64.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 64.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 63.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 63.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 63.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 63.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 63.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 63.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 62.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 62.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 62.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 62.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 62.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 62.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 61.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 61.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 61.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 61.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 61.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 61.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 61.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 61.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 61.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 61.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 61.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 61.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 60.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 60.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 60.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 60.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 60.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 60.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 59.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 59.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 59.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 59.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 59.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 59.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 59.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 59.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 59.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 59.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 58.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 58.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 58.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 58.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 58.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 58.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 58.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 58.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 58.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 58.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 57.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 57.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 57.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 57.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 57.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 56.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 55.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 55.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 55.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 55.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 55.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 55.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 55.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 55.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 55.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 54.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 54.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 54.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 54.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 53.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 53.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 52.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 52.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 52.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 52.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 52.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 52.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 52.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 51.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 51.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 50.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 50.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 50.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 50.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 49.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 49.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 49.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 49.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 48.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 48.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 46.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 44.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 43.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 42.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 41.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 41.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 41.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 40.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 39.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 37.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 64.3
Samples: 4

Max nTPM: 75.4
Min nTPM: 52.8
Sample A Female 75.4
Sample B Female 64.0
Sample C Male 65.1
Sample D Male 52.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 82.4
Samples: 4

Max nTPM: 83.5
Min nTPM: 81.0
Sample A Male 81.0
Sample B Male 83.2
Sample C Female 83.5
Sample D Female 82.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.1
68667270 Antisense, RP_050201_01_H11, Mouse strain C57BL/6J (56 days, male) 2.1

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