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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:159.3 nTPM
HPA Brain:129.8 nTPM
GTEx:159.3 nTPM
Pig:67.5 nTPM
Mouse:184.8 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 120.2
2226 Male, age 75, left hemisphere 135.5
1961 Female, age 42, unknown 104.9
Dorsomedial nucleus
nTPM: 104.5
1989 Male, age 62, unknown 133.7
2041 Female, age 72, unknown 95.2
2017 Female, age 42, unknown 84.6
Lateral hypothalamic area
nTPM: 129.8
1791 Male, age 80, right hemisphere 148.2
2228 Male, age 66, unknown 147.0
2271 Male, age 75, both hemispheres 131.9
2412 Male, age 62, unknown 91.9
Mammillary body
nTPM: 104.4
1923 Female, age 72, unknown 138.7
1948 Female, age 72, unknown 105.3
2413 Male, age 66, unknown 98.9
1945 Male, age 80, right hemisphere 96.8
1834 Female, age 42, unknown 82.3
Paraventricular nucleus
nTPM: 102.1
2700 Male, age 62, unknown 102.1
Preoptic area
nTPM: 102.3
1907 Male, age 80, right hemisphere 126.7
1861 Female, age 42, unknown 96.6
2414 Female, age 72, unknown 83.6
Supraoptic nucleus
nTPM: 87.0
2835 Female, age 72, unknown 102.2
1894 Female, age 72, unknown 80.7
2043 Male, age 62, unknown 78.1
Ventromedial nucleus
nTPM: 107.6
1982 Female, age 72, unknown 130.4
1822 Female, age 42, unknown 84.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 159.3
Samples: 257

Max nTPM: 305.9
Min nTPM: 74.0
Std nTPM: 37.8
Median nTPM: 156.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 305.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 265.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 254.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 254.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 253.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 249.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 247.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 246.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 244.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 239.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 234.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 232.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 228.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 224.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 224.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 221.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 220.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 219.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 218.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 217.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 216.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 213.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 212.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 211.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 211.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 210.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 208.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 206.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 204.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 203.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 202.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 201.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 200.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 200.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 199.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 198.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 197.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 197.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 196.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 195.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 195.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 194.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 194.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 193.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 192.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 190.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 190.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 190.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 190.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 190.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 189.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 189.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 188.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 188.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 188.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 187.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 187.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 187.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 184.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 183.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 183.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 182.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 180.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 179.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 179.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 179.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 178.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 178.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 176.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 176.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 176.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 175.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 175.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 175.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 175.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 175.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 174.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 174.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 173.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 173.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 173.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 172.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 172.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 172.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 172.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 172.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 171.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 171.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 171.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 171.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 170.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 170.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 169.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 169.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 168.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 168.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 167.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 166.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 166.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 166.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 166.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 165.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 165.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 164.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 164.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 164.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 164.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 162.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 162.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 162.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 162.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 161.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 161.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 161.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 161.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 160.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 160.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 160.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 160.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 159.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 159.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 158.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 158.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 158.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 157.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 157.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 157.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 157.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 156.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 156.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 156.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 155.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 155.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 155.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 154.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 154.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 154.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 154.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 153.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 153.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 153.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 153.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 153.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 152.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 152.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 152.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 152.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 151.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 151.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 151.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 151.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 151.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 151.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 149.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 149.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 148.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 147.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 147.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 147.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 146.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 145.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 144.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 144.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 144.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 144.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 143.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 143.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 143.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 142.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 142.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 142.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 141.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 141.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 140.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 140.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 140.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 139.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 138.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 138.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 138.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 137.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 137.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 136.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 136.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 136.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 135.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 135.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 134.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 133.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 133.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 133.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 133.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 132.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 132.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 132.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 131.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 130.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 129.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 129.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 129.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 129.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 128.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 128.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 128.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 127.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 127.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 127.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 126.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 126.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 126.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 126.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 125.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 124.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 124.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 123.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 122.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 122.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 122.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 122.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 122.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 121.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 121.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 120.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 120.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 119.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 119.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 119.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 118.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 115.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 115.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 115.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 114.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 113.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 112.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 112.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 111.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 111.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 110.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 109.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 106.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 105.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 105.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 104.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 103.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 100.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 99.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 99.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 98.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 98.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 89.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 88.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 87.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 83.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 82.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 80.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 74.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 74.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 67.5
Samples: 4

Max nTPM: 85.0
Min nTPM: 55.8
Sample A Female 85.0
Sample B Female 65.6
Sample C Male 63.7
Sample D Male 55.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 184.8
Samples: 4

Max nTPM: 205.0
Min nTPM: 169.9
Sample A Male 192.8
Sample B Male 205.0
Sample C Female 169.9
Sample D Female 171.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.6
71496300 Antisense, RP_050913_04_C05, Mouse strain C57BL/6J (56 days, male) 0.6

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