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CCDC85B
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  • SUMMARY

  • TISSUE

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  • CCDC85B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:127.8 nTPM
HPA Brain:100.4 nTPM
GTEx:127.8 nTPM
Pig:54.7 nTPM
Mouse:4.2 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 73.9
2226 Male, age 75, left hemisphere 82.5
1961 Female, age 42, unknown 65.3
Dorsomedial nucleus
nTPM: 94.4
1989 Male, age 62, unknown 156.3
2017 Female, age 42, unknown 74.4
2041 Female, age 72, unknown 52.4
Lateral hypothalamic area
nTPM: 100.4
1791 Male, age 80, right hemisphere 111.8
2228 Male, age 66, unknown 98.3
2271 Male, age 75, both hemispheres 96.4
2412 Male, age 62, unknown 95.1
Mammillary body
nTPM: 98.9
1923 Female, age 72, unknown 120.6
2413 Male, age 66, unknown 114.7
1945 Male, age 80, right hemisphere 89.7
1834 Female, age 42, unknown 85.1
1948 Female, age 72, unknown 84.5
Paraventricular nucleus
nTPM: 64.0
2700 Male, age 62, unknown 64.0
Preoptic area
nTPM: 76.7
1907 Male, age 80, right hemisphere 88.7
1861 Female, age 42, unknown 79.9
2414 Female, age 72, unknown 61.5
Supraoptic nucleus
nTPM: 62.5
2835 Female, age 72, unknown 85.7
1894 Female, age 72, unknown 51.9
2043 Male, age 62, unknown 49.8
Ventromedial nucleus
nTPM: 74.6
1982 Female, age 72, unknown 94.8
1822 Female, age 42, unknown 54.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 127.8
Samples: 257

Max nTPM: 349.3
Min nTPM: 13.0
Std nTPM: 57.3
Median nTPM: 118.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 349.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 339.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 337.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 316.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 287.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 275.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 274.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 272.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 270.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 265.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 260.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 254.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 251.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 247.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 245.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 243.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 239.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 236.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 233.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 224.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 218.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 211.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 210.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 209.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 204.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 202.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 202.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 198.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 192.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 191.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 190.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 188.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 187.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 186.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 183.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 180.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 179.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 176.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 175.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 175.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 174.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 173.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 172.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 168.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 168.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 167.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 167.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 166.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 163.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 163.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 161.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 160.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 159.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 159.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 158.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 156.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 155.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 155.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 155.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 154.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 154.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 154.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 153.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 152.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 149.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 149.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 148.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 147.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 146.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 145.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 145.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 144.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 144.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 144.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 143.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 142.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 141.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 141.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 140.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 140.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 140.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 140.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 139.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 137.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 137.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 136.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 135.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 134.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 134.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 133.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 133.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 133.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 132.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 132.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 131.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 131.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 131.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 131.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 130.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 130.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 129.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 129.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 128.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 128.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 128.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 128.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 127.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 127.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 126.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 126.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 125.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 125.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 125.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 124.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 123.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 123.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 122.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 122.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 122.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 122.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 122.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 121.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 120.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 120.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 120.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 120.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 119.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 118.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 118.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 118.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 118.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 118.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 117.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 116.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 116.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 115.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 114.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 114.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 113.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 113.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 113.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 113.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 113.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 112.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 112.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 111.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 110.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 109.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 108.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 108.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 108.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 107.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 107.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 107.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 107.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 106.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 106.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 106.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 106.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 105.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 105.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 104.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 104.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 104.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 103.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 103.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 103.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 103.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 103.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 102.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 102.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 102.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 101.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 101.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 101.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 101.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 100.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 100.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 100.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 98.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 96.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 95.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 95.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 95.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 94.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 94.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 93.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 93.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 92.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 91.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 91.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 91.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 91.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 90.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 89.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 88.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 87.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 86.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 86.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 85.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 85.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 85.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 84.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 84.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 84.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 83.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 82.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 82.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 81.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 80.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 79.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 79.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 78.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 78.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 78.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 78.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 75.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 75.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 75.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 75.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 75.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 74.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 72.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 71.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 70.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 70.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 69.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 68.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 67.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 66.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 66.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 66.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 64.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 63.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 63.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 62.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 61.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 59.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 59.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 58.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 58.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 57.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 57.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 55.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 53.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 52.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 50.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 50.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 50.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 47.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 44.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 44.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 43.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 35.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 33.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 32.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 13.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 54.7
Samples: 4

Max nTPM: 74.6
Min nTPM: 38.8
Sample A Female 74.6
Sample B Female 54.5
Sample C Male 50.8
Sample D Male 38.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 4.2
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.3
Sample A Male 5.1
Sample B Male 4.7
Sample C Female 3.3
Sample D Female 3.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.4
71574362 Antisense, RP_050915_03_F02, Mouse strain C57BL/6J (56 days, male) 0.4

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