HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:367.2 nTPM
HPA Brain:234.4 nTPM
GTEx:367.2 nTPM
FANTOM5:224.4 Scaled Tags Per Million
Pig:129.4 nTPM
Mouse:7.8 nTPM
Allen mouse:3.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054415
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 234.4
Sample id Sample description nTPM
Hippocampus
nTPM: 207.1
2621 Female, age 67, right hemisphere 242.0
1898 Male, age 80, left hemisphere 238.4
2529 Female, age 94, left hemisphere 227.6
1911 Female, age 85, right hemisphere 203.8
2148 Female, age 91, left hemisphere 184.5
1855 Male, age 76, left hemisphere 146.2
Dentate gyrus
nTPM: 196.1
2530 Female, age 94, left hemisphere 300.8
1927 Female, age 91, both hemispheres 212.0
2010 Male, age 76, both hemispheres 188.1
2531 Female, age 67, both hemispheres 182.9
2528 Male, age 74, both hemispheres 153.4
2246 Female, age 85, both hemispheres 139.3
Entorhinal gyrus
nTPM: 173.3
2613 Female, age 94, left hemisphere 217.1
2764 Male, age 80, right hemisphere 202.9
1938 Female, age 85, left hemisphere 168.3
1787 Male, age 76, left hemisphere 167.0
2686 Male, age 75, right hemisphere 149.3
2117 Female, age 91, right hemisphere 135.0
Hippocampus, CA1
nTPM: 234.4
2749 Male, age 80, left hemisphere 514.9
2527 Male, age 74, both hemispheres 230.8
1873 Female, age 85, both hemispheres 165.7
2082 Female, age 91, right hemisphere 135.3
2045 Male, age 76, both hemispheres 125.3
Hippocampus, CA2
nTPM: 200.8
1963 Male, age 80, left hemisphere 311.5
2437 Female, age 94, left hemisphere 212.6
2249 Male, age 74, both hemispheres 200.5
1892 Male, age 76, both hemispheres 193.2
2113 Female, age 91, right hemisphere 164.2
1940 Female, age 85, left hemisphere 123.1
Hippocampus, CA3
nTPM: 199.2
2137 Male, age 80, left hemisphere 356.8
2861 Female, age 67, both hemispheres 267.9
1867 Male, age 76, both hemispheres 190.5
2436 Male, age 74, both hemispheres 140.5
1891 Female, age 85, both hemispheres 124.9
2620 Female, age 94, left hemisphere 114.4
Parahippocampal cortex
nTPM: 167.1
2245 Female, age 91, both hemispheres 255.8
2250 Female, age 67, right hemisphere 196.6
2622 Female, age 67, right hemisphere 173.6
2018 Male, age 76, both hemispheres 172.9
1933 Female, age 85, both hemispheres 158.6
1990 Female, age 91, right hemisphere 156.4
2692 Male, age 74, both hemispheres 151.2
2532 Female, age 72, left hemisphere 146.5
1850 Male, age 80, both hemispheres 142.0
2693 Female, age 94, both hemispheres 117.8
Perirhinal gyrus
nTPM: 156.1
2521 Female, age 94, right hemisphere 181.4
1847 Female, age 91, left hemisphere 177.7
1794 Male, age 80, right hemisphere 169.6
1841 Female, age 85, right hemisphere 136.4
2848 Male, age 76, right hemisphere 115.3
Subiculum
nTPM: 168.7
1901 Male, age 80, both hemispheres 217.1
2438 Female, age 94, left hemisphere 178.6
2042 Male, age 76, both hemispheres 173.1
2619 Male, age 74, both hemispheres 161.7
1977 Female, age 85, both hemispheres 161.4
2729 Female, age 91, right hemisphere 120.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 367.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 367.2
Samples: 255

Max nTPM: 1213.0
Min nTPM: 22.9
Std nTPM: 196.1
Median nTPM: 314.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1213.0
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 1088.2
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1034.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 939.5
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 931.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 879.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 860.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 842.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 841.4
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 829.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 797.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 224.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 224.4
FF:10169-103B7 60 years, female 280.4
FF:10153-102I9 76 years, female 168.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 129.4
Pig sample Sample description nTPM
Subiculum
nTPM: 92.9
Samples: 4

Max nTPM: 127.5
Min nTPM: 78.7
Sample A Female 127.5
Sample B Female 83.9
Sample C Male 81.5
Sample D Male 78.7
Dorsal hippocampus
nTPM: 129.5
Samples: 4

Max nTPM: 153.6
Min nTPM: 110.2
Sample A Female 153.6
Sample B Female 125.3
Sample C Male 128.7
Sample D Male 110.2
Entorhinal cortex
nTPM: 114.9
Samples: 4

Max nTPM: 128.3
Min nTPM: 102.6
Sample A Female 102.6
Sample B Female 125.4
Sample C Male 128.3
Sample D Male 103.1
Ventral hippocampus
nTPM: 113.4
Samples: 4

Max nTPM: 152.6
Min nTPM: 82.0
Sample A Female 100.1
Sample B Female 82.0
Sample C Male 118.9
Sample D Male 152.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 7.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.2
Sample A Male 7.9
Sample B Male 7.4
Sample C Female 6.5
Sample D Female 6.2
Hippocampal formation
nTPM: 7.8
Samples: 4

Max nTPM: 8.3
Min nTPM: 7.4
Sample A Male 7.7
Sample B Male 8.3
Sample C Female 7.7
Sample D Female 7.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
71574362 Antisense, RP_050915_03_F02, Mouse strain C57BL/6J (56 days, male) 3.2

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