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  • TISSUE

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  • TOMM5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:85.6 nTPM
HPA Brain:48.4 nTPM
GTEx:85.6 nTPM
Pig:133.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 48.4
2226 Male, age 75, left hemisphere 60.2
1961 Female, age 42, unknown 36.6
Dorsomedial nucleus
nTPM: 37.9
2041 Female, age 72, unknown 46.9
1989 Male, age 62, unknown 37.0
2017 Female, age 42, unknown 29.7
Lateral hypothalamic area
nTPM: 46.4
1791 Male, age 80, right hemisphere 52.6
2228 Male, age 66, unknown 50.8
2271 Male, age 75, both hemispheres 46.6
2412 Male, age 62, unknown 35.4
Mammillary body
nTPM: 40.6
1923 Female, age 72, unknown 53.6
2413 Male, age 66, unknown 42.0
1948 Female, age 72, unknown 39.6
1945 Male, age 80, right hemisphere 38.0
1834 Female, age 42, unknown 29.9
Paraventricular nucleus
nTPM: 34.5
2700 Male, age 62, unknown 34.5
Preoptic area
nTPM: 38.6
1907 Male, age 80, right hemisphere 48.8
1861 Female, age 42, unknown 34.1
2414 Female, age 72, unknown 33.0
Supraoptic nucleus
nTPM: 39.9
1894 Female, age 72, unknown 49.9
2835 Female, age 72, unknown 35.2
2043 Male, age 62, unknown 34.7
Ventromedial nucleus
nTPM: 36.4
1982 Female, age 72, unknown 37.7
1822 Female, age 42, unknown 35.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 85.6
Samples: 257

Max nTPM: 193.1
Min nTPM: 46.2
Std nTPM: 20.0
Median nTPM: 83.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 193.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 160.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 157.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 142.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 139.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 136.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 135.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 130.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 124.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 123.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 120.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 120.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 118.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 117.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 117.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 116.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 115.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 114.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 112.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 112.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 112.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 111.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 110.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 110.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 110.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 108.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 108.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 108.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 107.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 107.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 107.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 107.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 106.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 105.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 105.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 105.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 104.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 104.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 103.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 102.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 101.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 101.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 101.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 101.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 101.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 100.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 100.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 100.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 100.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 100.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 99.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 99.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 99.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 99.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 99.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 99.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 98.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 98.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 98.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 97.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 97.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 97.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 96.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 96.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 96.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 96.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 96.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 95.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 95.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 95.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 95.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 94.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 94.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 94.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 94.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 93.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 93.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 93.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 93.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 93.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 92.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 92.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 92.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 91.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 91.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 91.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 91.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 90.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 90.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 90.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 90.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 90.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 90.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 90.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 90.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 89.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 89.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 89.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 89.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 89.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 89.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 88.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 88.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 87.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 87.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 87.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 87.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 87.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 86.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 86.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 86.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 86.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 85.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 85.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 85.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 85.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 85.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 85.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 84.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 84.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 84.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 84.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 84.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 83.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 83.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 83.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 83.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 83.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 83.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 83.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 83.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 83.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 83.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 82.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 82.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 82.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 82.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 81.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 81.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 81.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 81.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 81.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 81.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 81.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 80.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 80.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 80.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 80.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 80.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 80.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 79.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 79.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 79.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 79.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 79.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 79.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 79.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 78.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 78.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 78.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 77.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 77.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 77.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 77.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 77.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 76.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 76.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 76.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 76.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 75.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 75.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 75.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 75.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 75.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 74.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 74.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 74.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 74.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 74.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 74.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 74.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 73.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 73.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 73.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 73.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 73.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 72.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 72.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 72.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 72.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 71.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 71.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 71.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 71.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 71.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 70.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 70.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 70.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 70.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 70.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 70.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 69.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 69.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 69.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 69.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 69.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 69.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 69.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 69.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 69.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 69.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 68.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 68.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 68.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 68.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 67.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 67.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 67.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 67.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 66.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 66.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 66.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 66.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 65.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 65.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 65.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 65.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 64.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 64.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 64.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 63.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 63.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 62.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 62.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 62.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 62.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 62.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 61.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 61.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 61.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 61.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 60.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 57.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 57.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 57.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 56.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 55.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 55.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 54.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 54.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 54.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 53.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 52.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 51.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 50.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 49.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 46.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 133.7
Samples: 4

Max nTPM: 186.4
Min nTPM: 95.3
Sample A Female 186.4
Sample B Female 134.5
Sample C Male 118.6
Sample D Male 95.3

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