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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1995.9 nTPM
HPA:1792.2 nTPM
GTEx:1995.9 nTPM
FANTOM5:5069.2 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA053635
Glandular cells Medium


SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1792.2
overview
Female, age 68
Salivary gland sample 216
nTPM: 2114.8
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1435.7
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1826.1
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1995.9
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1995.9
Samples: 181

Max nTPM: 4169.3
Min nTPM: 1046.7
Std nTPM: 439.1
Median nTPM: 1938.4
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 4169.3
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 4001.5
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 3611.2
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 3092.4
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 3042.2
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 2984.5
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 2925.7
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 2751.3
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 2714.7
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 2714.4
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 2708.6
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 2675.0
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 2673.3
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 2664.7
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 2579.7
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 2508.1
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 2485.8
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 2476.9
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 2455.7
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 2437.0
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 2427.8
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 2408.2
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 2398.8
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 2392.0
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 2368.3
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 2365.2
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 2356.2
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 2350.2
GTEX-1445S-2926-SM-5O993 60-69 years, male 2306.7
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 2305.1
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 2288.8
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 2265.0
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 2264.2
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 2259.4
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 2255.2
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 2252.4
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 2236.0
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 2235.2
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 2231.0
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 2226.0
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 2222.3
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 2221.9
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 2221.8
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 2217.6
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 2211.9
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 2211.5
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 2209.5
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 2204.9
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 2203.5
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 2196.9
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 2194.1
GTEX-11P82-0926-SM-5986X 20-29 years, male 2181.0
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 2176.3
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 2173.1
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 2169.0
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 2162.2
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 2158.9
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 2155.4
GTEX-15SHV-2226-SM-6M464 60-69 years, male 2148.0
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 2146.7
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 2143.5
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 2142.9
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 2112.9
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 2112.6
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 2097.6
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 2097.6
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 2076.1
GTEX-13113-1526-SM-5EGHV 60-69 years, female 2052.3
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 2045.6
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 2043.9
GTEX-146FR-1226-SM-5MR78 60-69 years, female 2043.9
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 2043.5
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 2041.5
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 2029.8
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 2027.5
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 2017.7
GTEX-X261-2426-SM-4PQZU 50-59 years, male 2001.8
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 1998.4
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1997.9
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1993.3
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1986.1
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1969.1
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1967.3
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 1960.7
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1955.1
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1953.2
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 1947.1
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 1946.1
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 1942.6
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1941.6
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1938.4
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 1927.1
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1909.4
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1904.7
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1904.2
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 1882.3
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 1878.3
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 1877.2
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1872.9
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1866.0
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 1863.1
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 1857.1
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1851.2
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1832.5
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1827.8
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 1825.7
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 1821.3
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1821.3
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1814.8
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1814.7
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 1812.1
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 1811.3
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 1809.4
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1809.1
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1808.6
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1808.4
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 1801.9
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1774.6
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1765.0
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1761.1
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 1760.0
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1759.2
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1757.9
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1755.9
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1755.4
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 1753.6
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1747.3
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 1742.1
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1739.2
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1737.2
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 1736.6
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1735.4
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1733.8
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 1725.5
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1725.3
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 1722.6
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1719.6
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1703.6
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1703.2
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 1686.0
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 1681.9
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1681.5
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1664.1
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1661.5
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 1655.3
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1636.9
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1636.6
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1634.1
GTEX-178AV-1426-SM-6LLID 40-49 years, male 1632.9
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1628.8
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1628.1
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1622.9
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 1620.8
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1617.9
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1616.7
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 1602.5
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 1601.5
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 1592.8
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1587.3
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1585.3
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1565.5
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1560.5
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1557.8
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 1551.0
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 1543.3
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1502.0
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1501.9
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1501.5
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1499.7
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1497.1
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1488.2
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 1463.7
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 1449.6
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1439.1
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 1430.6
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1418.0
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 1416.5
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 1392.8
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 1358.0
GTEX-1B932-0626-SM-731EM 40-49 years, female 1192.6
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1046.7
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5069.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 5069.2
FF:10199-103F1 23 years, male 5069.2
Salivary gland
Scaled Tags Per Million: 4750.5
FF:10093-102C3 16-60 years, mixed 4750.5
Submaxillary gland
Scaled Tags Per Million: 4462.6
FF:10202-103F4 24 years, male 4462.6

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