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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
449.5
nTPM
Monaco:
131.9
nTPM
Schmiedel:
72.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
449.5
HPA sample
nTPM
gdT-cell nTPM: 312.8
Samples: 6
Max nTPM: 339.0
Min nTPM: 266.8
P10809_1007
271.6
P10809_1022
334.9
P10809_1041
332.7
P10809_1060
266.8
P10809_1077
331.8
P10809_1098
339.0
MAIT T-cell nTPM: 271.2
Samples: 6
Max nTPM: 335.6
Min nTPM: 187.1
P10809_1006
187.1
P10809_1024
312.4
P10809_1043
275.2
P10809_1062
236.6
P10809_1083
280.5
P10809_1097
335.6
Memory CD4 T-cell nTPM: 342.7
Samples: 6
Max nTPM: 385.8
Min nTPM: 263.6
P10809_1014
263.6
P10809_1026
352.5
P10809_1045
373.7
P10809_1064
363.9
P10809_1086
316.6
P10809_1113
385.8
Memory CD8 T-cell nTPM: 319.1
Samples: 5
Max nTPM: 375.6
Min nTPM: 249.9
P10809_1012
249.9
P10809_1027
348.6
P10809_1046
375.6
P10809_1065
305.9
P10809_1111
315.3
Naive CD4 T-cell nTPM: 340.7
Samples: 6
Max nTPM: 400.5
Min nTPM: 236.7
P10809_1015
236.7
P10809_1030
364.0
P10809_1049
400.5
P10809_1068
311.7
P10809_1085
371.4
P10809_1112
359.8
Naive CD8 T-cell nTPM: 296.1
Samples: 6
Max nTPM: 322.1
Min nTPM: 251.0
P10809_1016
251.0
P10809_1031
287.7
P10809_1050
298.8
P10809_1069
322.1
P10809_1087
304.8
P10809_1110
312.0
T-reg nTPM: 449.5
Samples: 6
Max nTPM: 593.0
Min nTPM: 301.4
P10809_1018
301.4
P10809_1037
444.9
P10809_1056
593.0
P10809_1075
414.1
P10809_1094
450.7
P10809_1106
493.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.8
Samples: 4
Max nTPM: 110.5
Min nTPM: 42.2
RHH5202_R3573
42.2
RHH5230_R3602
74.5
RHH5259_R3631
95.8
RHH5288_R3660
110.5
Effector memory CD8 T-cell nTPM: 67.3
Samples: 4
Max nTPM: 87.0
Min nTPM: 52.5
RHH5203_R3574
64.3
RHH5231_R3603
65.4
RHH5260_R3632
87.0
RHH5289_R3661
52.5
MAIT T-cell nTPM: 77.3
Samples: 4
Max nTPM: 110.0
Min nTPM: 63.2
RHH5233_R3605
72.3
RHH5205_R3576
63.5
RHH5262_R3634
63.2
RHH5297_R3663
110.0
Memory CD4 T-cell TFH nTPM: 130.3
Samples: 4
Max nTPM: 275.5
Min nTPM: 78.6
RHH5300_R3666
78.6
RHH5236_R3608
275.5
RHH5265_R3637
85.3
RHH5208_R3579
81.9
Memory CD4 T-cell Th1 nTPM: 124.8
Samples: 4
Max nTPM: 180.8
Min nTPM: 81.5
RHH5210_R3581
81.5
RHH5302_R3668
180.8
RHH5238_R3610
153.3
RHH5267_R3639
83.7
Memory CD4 T-cell Th1/Th17 nTPM: 93.2
Samples: 4
Max nTPM: 112.2
Min nTPM: 77.9
RHH5303_R3669
112.2
RHH5211_R3582
91.3
RHH5239_R3611
77.9
RHH5268_R3640
91.5
Memory CD4 T-cell Th17 nTPM: 81.0
Samples: 4
Max nTPM: 87.0
Min nTPM: 64.0
RHH5304_R3670
87.0
RHH5212_R3583
86.1
RHH5240_R3612
87.0
RHH5269_R3641
64.0
Memory CD4 T-cell Th2 nTPM: 101.4
Samples: 4
Max nTPM: 157.9
Min nTPM: 67.2
RHH5305_R3671
100.3
RHH5213_R3584
80.3
RHH5241_R3613
157.9
RHH5270_R3642
67.2
Naive CD4 T-cell nTPM: 96.4
Samples: 4
Max nTPM: 137.6
Min nTPM: 78.3
RHH5306_R3672
84.3
RHH5214_R3585
137.6
RHH5242_R3614
85.2
RHH5271_R3643
78.3
Naive CD8 T-cell nTPM: 74.0
Samples: 4
Max nTPM: 88.1
Min nTPM: 53.1
RHH5201_R3572
53.1
RHH5229_R3601
84.6
RHH5258_R3630
70.1
RHH5287_R3659
88.1
Non-Vd2 gdTCR nTPM: 109.2
Samples: 4
Max nTPM: 144.9
Min nTPM: 76.4
RHH5235_R3607
94.3
RHH5264_R3636
121.0
RHH5207_R3578
76.4
RHH5299_R3665
144.9
T-reg nTPM: 110.1
Samples: 4
Max nTPM: 134.9
Min nTPM: 81.2
RHH5301_R3667
134.9
RHH5237_R3609
114.2
RHH5266_R3638
81.2
RHH5209_R3580
110.1
Terminal effector memory CD4 T-cell nTPM: 87.5
Samples: 2
Max nTPM: 91.8
Min nTPM: 83.1
RHH5243_R3615
91.8
RHH5272_R3644
83.1
Terminal effector memory CD8 T-cell nTPM: 131.9
Samples: 4
Max nTPM: 229.3
Min nTPM: 81.5
RHH5232_R3604
93.0
RHH5204_R3575
229.3
RHH5261_R3633
81.5
RHH5296_R3662
123.7
Vd2 gdTCR nTPM: 110.8
Samples: 4
Max nTPM: 168.2
Min nTPM: 75.9
RHH5234_R3606
82.2
RHH5206_R3577
168.2
RHH5263_R3635
75.9
RHH5298_R3664
116.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.