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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • AATK
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:132.2 nTPM
GTEx:41.6 nTPM
FANTOM5:68.3 Scaled Tags Per Million
Pig:19.4 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.2
Sample id Sample description nTPM
Putamen
nTPM: 132.2
2647 Male, age 75, left hemisphere 217.4
2489 Female, age 72, unknown 155.8
1829 Male, age 74, unknown 138.7
2466 Female, age 79, unknown 118.0
1937 Female, age 91, right hemisphere 114.6
2482 Female, age 94, left hemisphere 113.8
1838 Male, age 80, right hemisphere 67.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 41.6
Samples: 254

Max nTPM: 147.3
Min nTPM: 6.4
Std nTPM: 19.7
Median nTPM: 37.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 147.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 120.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 102.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 101.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 90.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 89.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 85.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 79.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 77.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 77.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 77.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 76.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 76.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 75.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 75.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 74.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 72.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 72.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 72.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 70.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 70.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 69.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 68.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 67.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 67.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 66.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 66.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 66.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 66.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 65.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 65.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 64.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 64.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 64.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 64.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 63.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 62.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 62.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 61.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 60.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 60.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 60.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 59.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 59.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 58.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 58.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 58.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 57.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 57.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 56.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 56.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 55.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 55.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 55.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 55.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 54.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 54.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 54.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 54.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 53.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 53.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 53.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 53.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 52.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 52.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 52.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 52.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 51.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 51.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 51.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 50.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 50.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 49.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 49.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 49.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 49.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 49.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 48.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 48.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 47.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 46.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 46.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 46.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 46.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 45.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 45.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 44.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 44.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 44.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 44.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 43.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 43.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 43.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 43.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 43.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 43.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 42.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 42.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 42.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 42.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 42.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 42.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 41.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 41.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 41.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 41.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 41.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 40.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 40.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 40.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 40.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 40.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 40.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 40.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 39.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 39.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 39.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 39.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 38.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 38.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 38.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 38.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 38.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 38.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 38.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 37.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 37.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 37.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 37.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 37.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 37.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 37.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 37.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 37.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 37.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 36.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 36.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 36.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 36.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 36.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 36.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 36.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 36.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 35.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 35.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 35.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 35.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 35.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 35.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 34.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 34.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 34.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 34.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 34.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 34.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 34.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 33.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 33.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 33.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 33.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 33.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 33.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 32.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 32.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 32.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 32.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 32.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 32.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 32.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 31.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 31.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 31.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 31.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 31.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 31.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 30.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 30.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 30.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 30.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 29.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 29.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 29.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 29.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 29.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 29.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 29.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 29.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 28.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 28.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 28.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 28.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 27.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 27.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 27.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 27.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 27.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 26.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 26.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 26.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 26.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 26.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 26.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 26.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 26.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 25.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 25.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 25.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 24.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 24.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 24.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 24.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 24.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 23.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 23.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 23.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 22.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 22.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 22.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 22.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 22.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 22.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 22.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 21.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 20.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 20.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 20.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 20.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 20.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 19.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 19.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 18.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 18.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 17.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 17.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 17.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 17.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 17.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 16.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 16.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 16.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 16.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 16.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 16.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 15.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 14.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 14.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 12.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 12.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 11.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 11.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 9.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 8.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 6.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

68.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 68.3
FF:10176-103C5 60 years, female 68.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.4
Pig sample Sample description nTPM
Putamen
nTPM: 19.4
Samples: 3

Max nTPM: 25.5
Min nTPM: 15.9
Sample B Female 15.9
Sample C Male 16.8
Sample D Male 25.5

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