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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • PCP4
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FRONTAL CORTEX FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTAL AREA SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:1310.1 nTPM
GTEx:2168.6 nTPM
FANTOM5:2954.2 Scaled Tags Per Million
Macaque:1638.9 nTPM
Pig:3835.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1310.1
Sample id Sample description nTPM
Putamen
nTPM: 1310.1
1937 Female, age 91, right hemisphere 2465.8
1838 Male, age 80, right hemisphere 1727.8
1829 Male, age 74, unknown 1683.2
2466 Female, age 79, unknown 1248.8
2647 Male, age 75, left hemisphere 754.0
2482 Female, age 94, left hemisphere 668.8
2489 Female, age 72, unknown 622.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2168.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 2168.6
Samples: 254

Max nTPM: 6547.1
Min nTPM: 115.0
Std nTPM: 1490.2
Median nTPM: 1926.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 6547.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 6492.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 6420.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 6231.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 6157.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 5802.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 5650.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 5542.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 5455.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 5367.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 5160.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 5138.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 4956.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 4868.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 4780.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4694.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 4581.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 4565.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 4525.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 4427.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 4373.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 4345.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 4321.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 4310.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 4295.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 4136.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 4128.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 4111.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 4083.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 4027.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 3901.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 3856.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 3827.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 3794.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 3779.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 3753.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 3741.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 3699.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 3681.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 3676.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 3636.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 3584.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 3556.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 3535.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 3522.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 3453.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 3451.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 3438.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 3433.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 3407.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 3404.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 3402.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 3395.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 3387.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 3385.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 3365.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 3348.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 3338.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 3307.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 3271.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 3250.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 3247.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 3229.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 3224.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 3216.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 3193.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 3175.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 3173.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 3146.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 3143.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 3131.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 3086.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3076.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 3062.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 3038.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 3036.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 3006.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 2985.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 2942.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 2932.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 2924.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 2921.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 2919.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 2917.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 2897.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 2889.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 2744.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 2715.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 2692.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 2689.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 2655.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 2654.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 2648.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 2611.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 2566.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 2523.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 2496.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 2491.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 2470.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 2455.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 2433.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 2432.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 2393.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 2351.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 2331.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 2304.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 2298.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 2294.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 2278.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 2266.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 2265.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 2243.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 2230.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 2173.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 2169.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 2140.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2140.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 2123.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 2096.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 2061.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 2053.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 2010.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1988.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1987.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1968.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1950.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1935.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1917.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1911.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1884.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1877.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1843.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1822.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1815.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1812.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 1783.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1779.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1773.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1727.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1723.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1723.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1722.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1720.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 1696.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1689.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1680.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1635.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1607.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1594.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1588.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1537.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1533.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1519.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1513.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1497.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1477.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 1420.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1409.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1378.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1365.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1360.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1331.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1330.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1319.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1299.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1230.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1230.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1206.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1204.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1199.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1185.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1180.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1167.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1106.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1083.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1052.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 1025.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1009.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 998.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 997.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 976.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 963.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 958.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 952.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 933.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 926.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 925.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 920.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 915.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 908.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 885.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 879.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 865.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 853.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 830.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 800.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 793.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 788.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 765.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 734.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 711.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 699.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 693.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 693.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 667.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 656.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 656.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 645.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 638.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 628.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 606.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 595.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 587.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 585.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 579.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 565.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 556.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 553.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 527.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 516.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 510.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 498.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 489.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 480.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 478.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 445.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 442.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 441.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 435.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 423.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 394.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 381.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 378.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 366.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 363.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 363.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 353.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 351.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 335.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 330.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 304.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 271.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 269.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 268.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 262.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 255.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 255.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 255.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 208.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 196.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 191.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 161.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 154.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 115.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2954.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 2954.2
FF:10176-103C5 60 years, female 2954.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1638.9
Macaque sample Sample description nTPM
Putamen
nTPM: 1638.9
Samples: 2

Max nTPM: 2270.3
Min nTPM: 1007.4
Sample A 1007.4
Sample B 2270.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3835.3
Pig sample Sample description nTPM
Putamen
nTPM: 3835.3
Samples: 3

Max nTPM: 6441.8
Min nTPM: 2491.6
Sample B Female 2491.6
Sample C Male 6441.8
Sample D Male 2572.4

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