HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:166.1 nTPM
HPA Brain:96.1 nTPM
GTEx:166.1 nTPM
FANTOM5:60.9 Scaled Tags Per Million
Pig:26.7 nTPM
Mouse:24.1 nTPM
Allen mouse:3.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB002607
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 96.1
Sample id Sample description nTPM
Hippocampus
nTPM: 86.4
2529 Female, age 94, left hemisphere 112.6
1911 Female, age 85, right hemisphere 95.6
1898 Male, age 80, left hemisphere 86.2
2621 Female, age 67, right hemisphere 80.7
2148 Female, age 91, left hemisphere 73.2
1855 Male, age 76, left hemisphere 70.2
Dentate gyrus
nTPM: 88.5
2530 Female, age 94, left hemisphere 146.4
2531 Female, age 67, both hemispheres 97.6
2010 Male, age 76, both hemispheres 91.3
2528 Male, age 74, both hemispheres 77.0
1927 Female, age 91, both hemispheres 63.4
2246 Female, age 85, both hemispheres 55.1
Entorhinal gyrus
nTPM: 71.3
1787 Male, age 76, left hemisphere 92.3
2686 Male, age 75, right hemisphere 85.3
2117 Female, age 91, right hemisphere 73.7
2764 Male, age 80, right hemisphere 63.0
2613 Female, age 94, left hemisphere 59.0
1938 Female, age 85, left hemisphere 54.5
Hippocampus, CA1
nTPM: 73.5
2527 Male, age 74, both hemispheres 86.6
2082 Female, age 91, right hemisphere 77.4
2749 Male, age 80, left hemisphere 70.4
2045 Male, age 76, both hemispheres 68.9
1873 Female, age 85, both hemispheres 63.9
Hippocampus, CA2
nTPM: 96.1
1963 Male, age 80, left hemisphere 123.1
2437 Female, age 94, left hemisphere 117.9
2249 Male, age 74, both hemispheres 103.2
2113 Female, age 91, right hemisphere 92.3
1892 Male, age 76, both hemispheres 72.6
1940 Female, age 85, left hemisphere 67.3
Hippocampus, CA3
nTPM: 94.7
2861 Female, age 67, both hemispheres 154.1
1867 Male, age 76, both hemispheres 105.8
2436 Male, age 74, both hemispheres 98.9
2137 Male, age 80, left hemisphere 73.1
1891 Female, age 85, both hemispheres 69.1
2620 Female, age 94, left hemisphere 67.2
Parahippocampal cortex
nTPM: 65.7
2018 Male, age 76, both hemispheres 117.5
2622 Female, age 67, right hemisphere 73.3
2245 Female, age 91, both hemispheres 67.7
1990 Female, age 91, right hemisphere 66.2
2692 Male, age 74, both hemispheres 60.9
2532 Female, age 72, left hemisphere 59.5
2250 Female, age 67, right hemisphere 56.2
1933 Female, age 85, both hemispheres 52.9
1850 Male, age 80, both hemispheres 51.9
2693 Female, age 94, both hemispheres 50.3
Perirhinal gyrus
nTPM: 55.8
1794 Male, age 80, right hemisphere 66.6
1841 Female, age 85, right hemisphere 60.4
2521 Female, age 94, right hemisphere 55.7
2848 Male, age 76, right hemisphere 49.1
1847 Female, age 91, left hemisphere 47.2
Subiculum
nTPM: 72.2
2042 Male, age 76, both hemispheres 98.3
2619 Male, age 74, both hemispheres 78.7
2438 Female, age 94, left hemisphere 66.1
1977 Female, age 85, both hemispheres 65.2
2729 Female, age 91, right hemisphere 63.6
1901 Male, age 80, both hemispheres 61.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 166.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 166.1
Samples: 255

Max nTPM: 637.3
Min nTPM: 27.9
Std nTPM: 106.2
Median nTPM: 141.1
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 637.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 564.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 552.1
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 516.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 450.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 444.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 442.5
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 422.9
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 406.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 394.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 393.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 60.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.9
FF:10153-102I9 76 years, female 74.1
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 26.7
Pig sample Sample description nTPM
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 21.1
Min nTPM: 14.3
Sample A Female 21.1
Sample B Female 14.3
Sample C Male 20.8
Sample D Male 19.2
Dorsal hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 22.4
Min nTPM: 16.7
Sample A Female 22.1
Sample B Female 19.1
Sample C Male 22.4
Sample D Male 16.7
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 35.9
Min nTPM: 15.1
Sample A Female 22.7
Sample B Female 28.9
Sample C Male 35.9
Sample D Male 15.1
Ventral hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 43.9
Min nTPM: 19.6
Sample A Female 23.5
Sample B Female 19.8
Sample C Male 43.9
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 27.2
Min nTPM: 21.9
Sample A Male 27.2
Sample B Male 24.6
Sample C Female 22.8
Sample D Female 21.9
Hippocampal formation
nTPM: 23.2
Samples: 4

Max nTPM: 24.1
Min nTPM: 21.8
Sample A Male 23.1
Sample B Male 24.1
Sample C Female 21.8
Sample D Female 23.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
79360268 Antisense, RP_071018_01_F08, Mouse strain C57BL/6J (56 days, male) 3.0
79490120 Antisense, RP_071018_01_F08, Mouse strain C57BL/6J (56 days, male) 2.6

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