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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • CEND1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:160.2 nTPM
GTEx:167.2 nTPM
FANTOM5:328.7 Scaled Tags Per Million
Pig:216.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.2
Sample id Sample description nTPM
Putamen
nTPM: 160.2
2647 Male, age 75, left hemisphere 219.8
1937 Female, age 91, right hemisphere 157.9
1838 Male, age 80, right hemisphere 157.1
1829 Male, age 74, unknown 155.2
2482 Female, age 94, left hemisphere 149.3
2489 Female, age 72, unknown 141.8
2466 Female, age 79, unknown 140.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

167.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 167.2
Samples: 254

Max nTPM: 329.7
Min nTPM: 56.3
Std nTPM: 44.3
Median nTPM: 169.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 329.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 283.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 280.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 279.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 268.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 261.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 258.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 255.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 251.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 250.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 247.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 241.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 239.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 232.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 230.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 230.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 229.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 229.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 228.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 228.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 226.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 223.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 221.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 220.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 220.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 219.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 219.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 218.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 218.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 217.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 216.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 215.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 215.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 215.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 214.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 212.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 212.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 211.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 211.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 206.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 205.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 205.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 204.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 203.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 203.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 203.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 202.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 201.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 200.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 200.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 200.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 199.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 198.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 198.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 198.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 197.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 196.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 195.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 194.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 193.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 193.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 193.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 192.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 192.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 192.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 192.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 191.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 191.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 191.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 191.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 190.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 190.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 189.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 188.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 188.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 188.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 188.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 188.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 188.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 188.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 188.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 186.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 186.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 185.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 185.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 185.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 184.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 184.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 184.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 184.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 184.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 183.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 183.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 183.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 182.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 182.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 182.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 182.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 182.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 181.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 181.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 181.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 180.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 180.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 180.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 179.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 178.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 178.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 177.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 175.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 175.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 174.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 173.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 173.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 173.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 173.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 172.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 171.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 171.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 171.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 171.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 171.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 170.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 170.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 170.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 170.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 169.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 169.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 168.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 167.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 167.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 167.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 166.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 166.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 166.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 165.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 165.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 165.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 165.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 165.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 164.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 164.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 164.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 163.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 162.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 161.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 161.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 161.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 161.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 160.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 160.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 159.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 159.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 158.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 158.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 157.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 157.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 156.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 156.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 155.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 155.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 154.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 154.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 153.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 152.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 152.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 152.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 152.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 152.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 151.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 151.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 150.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 148.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 147.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 147.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 147.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 146.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 145.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 145.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 145.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 144.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 144.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 144.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 143.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 143.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 142.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 141.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 140.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 139.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 138.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 137.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 136.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 135.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 135.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 135.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 134.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 134.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 133.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 132.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 132.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 132.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 132.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 129.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 129.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 128.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 128.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 127.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 126.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 126.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 125.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 123.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 122.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 122.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 121.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 120.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 119.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 119.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 118.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 118.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 116.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 115.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 115.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 114.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 113.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 113.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 112.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 111.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 111.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 109.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 109.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 108.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 107.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 106.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 104.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 103.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 102.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 101.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 97.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 94.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 93.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 93.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 89.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 89.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 87.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 85.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 81.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 77.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 76.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 74.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 70.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 67.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 67.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 59.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 56.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

328.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 328.7
FF:10176-103C5 60 years, female 328.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

216.9
Pig sample Sample description nTPM
Putamen
nTPM: 217.0
Samples: 3

Max nTPM: 301.3
Min nTPM: 159.5
Sample B Female 159.5
Sample C Male 301.3
Sample D Male 190.1

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