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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • EVOLUTION

  • BCAP31
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:117.4 nTPM
GTEx:198.2 nTPM
FANTOM5:49.8 Scaled Tags Per Million
Macaque:30.6 nTPM
Pig:200.4 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.4
Sample id Sample description nTPM
Putamen
nTPM: 117.4
2466 Female, age 79, unknown 135.8
1937 Female, age 91, right hemisphere 135.0
1838 Male, age 80, right hemisphere 126.5
1829 Male, age 74, unknown 121.7
2482 Female, age 94, left hemisphere 114.8
2647 Male, age 75, left hemisphere 94.3
2489 Female, age 72, unknown 93.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 198.2
Samples: 254

Max nTPM: 385.8
Min nTPM: 90.3
Std nTPM: 37.2
Median nTPM: 195.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 385.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 330.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 285.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 283.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 282.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 278.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 277.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 276.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 272.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 272.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 269.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 265.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 260.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 259.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 259.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 259.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 259.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 258.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 256.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 254.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 254.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 252.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 252.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 250.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 250.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 245.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 245.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 244.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 241.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 241.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 240.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 239.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 239.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 238.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 236.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 235.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 235.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 235.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 234.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 234.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 234.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 233.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 233.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 233.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 232.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 232.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 230.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 228.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 227.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 227.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 227.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 227.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 227.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 226.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 224.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 224.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 224.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 223.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 222.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 222.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 221.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 221.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 216.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 216.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 216.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 216.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 215.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 215.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 215.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 214.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 214.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 214.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 212.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 212.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 211.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 210.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 210.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 210.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 210.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 210.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 209.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 209.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 209.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 208.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 208.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 207.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 206.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 206.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 206.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 206.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 205.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 205.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 205.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 205.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 205.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 205.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 205.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 204.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 204.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 204.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 204.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 203.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 202.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 202.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 202.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 202.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 202.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 202.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 201.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 201.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 201.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 200.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 200.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 200.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 199.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 199.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 198.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 197.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 197.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 196.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 196.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 196.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 196.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 196.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 196.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 196.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 195.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 195.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 195.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 195.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 194.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 194.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 193.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 193.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 193.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 193.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 192.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 192.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 192.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 192.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 192.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 191.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 191.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 190.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 190.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 188.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 188.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 187.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 187.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 186.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 186.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 186.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 186.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 185.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 185.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 184.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 184.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 184.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 183.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 183.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 183.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 183.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 183.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 183.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 183.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 183.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 183.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 182.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 182.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 181.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 179.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 178.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 178.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 177.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 177.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 177.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 177.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 177.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 176.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 176.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 176.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 176.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 175.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 175.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 175.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 175.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 175.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 175.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 175.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 174.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 174.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 173.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 173.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 173.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 173.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 172.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 172.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 171.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 171.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 170.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 170.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 168.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 168.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 167.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 167.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 166.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 166.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 166.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 165.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 165.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 165.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 165.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 163.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 162.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 162.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 162.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 162.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 160.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 159.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 159.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 159.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 159.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 158.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 158.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 157.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 156.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 155.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 155.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 154.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 154.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 152.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 151.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 150.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 150.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 149.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 149.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 148.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 148.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 147.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 147.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 147.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 145.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 144.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 143.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 140.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 140.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 139.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 136.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 136.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 135.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 135.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 132.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 109.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 90.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

49.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 49.8
FF:10176-103C5 60 years, female 49.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.6
Macaque sample Sample description nTPM
Putamen
nTPM: 30.6
Samples: 2

Max nTPM: 31.5
Min nTPM: 29.7
Sample A 29.7
Sample B 31.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

200.4
Pig sample Sample description nTPM
Putamen
nTPM: 200.4
Samples: 3

Max nTPM: 249.4
Min nTPM: 152.7
Sample B Female 152.7
Sample C Male 249.4
Sample D Male 199.1

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