RPS23
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BETA
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  • RPS23
EVOLUTIONARY MEDULLA OBLONGATA Show tissue menu
BRAIN67 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD WHITE MATTER
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:392.7 nTPM
FANTOM5:378.4 Scaled Tags Per Million
Macaque:230.0 nTPM
Pig:0.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

392.7
Sample id Sample description nTPM
Area postrema
nTPM: 340.3
2799 Male, age 61, both hemispheres 409.4
2306 Male, age 80, both hemispheres 399.1
2054 Male, age 76, both hemispheres 212.2
Dorsal medullary reticular nucleus
nTPM: 289.0
2373 Male, age 61, both hemispheres 340.2
2040 Female, age 85, both hemispheres 290.3
2088 Male, age 76, both hemispheres 236.4
Dorsal motor vagal complex
nTPM: 330.3
2797 Male, age 61, both hemispheres 539.8
2643 Male, age 74, both hemispheres 361.6
2807 Female, age 85, both hemispheres 337.3
2133 Female, age 91, both hemispheres 312.5
2844 Male, age 55, unknown 291.5
2000 Male, age 74, unknown 279.4
2813 Female, age 72, unknown 268.4
2185 Male, age 76, both hemispheres 252.1
Gigantocellular reticular nuclei, medullary
nTPM: 299.9
2314 Male, age 61, both hemispheres 367.2
2387 Female, age 91, both hemispheres 318.8
1876 Female, age 85, both hemispheres 309.6
2310 Male, age 80, both hemispheres 305.5
2022 Male, age 76, right hemisphere 273.8
2462 Male, age 74, both hemispheres 224.5
Gigantocellular reticular nuclei, pars
nTPM: 273.5
2084 Female, age 85, both hemispheres 326.4
2706 Male, age 80, both hemispheres 283.7
2336 Male, age 61, both hemispheres 267.3
2330 Male, age 80, both hemispheres 246.2
2168 Male, age 76, both hemispheres 244.1
Inferior olive
nTPM: 372.6
2628 Female, age 91, both hemispheres 405.8
2563 Male, age 74, both hemispheres 385.0
2178 Male, age 61, both hemispheres 374.1
2085 Female, age 85, both hemispheres 350.2
2379 Male, age 80, both hemispheres 348.0
Lateral medullary reticular nucleus
nTPM: 340.6
2852 Male, age 80, both hemispheres 403.5
2804 Female, age 91, both hemispheres 378.7
2190 Female, age 85, both hemispheres 346.3
2374 Male, age 61, both hemispheres 332.4
2305 Male, age 74, both hemispheres 297.9
2044 Male, age 76, both hemispheres 284.8
Medial olivary nucleus
nTPM: 392.7
1943 Male, age 61, both hemispheres 433.0
1962 Male, age 76, both hemispheres 412.7
2138 Female, age 91, both hemispheres 378.0
2851 Male, age 80, both hemispheres 347.1
Medial vestibular nucleus
nTPM: 316.5
2624 Male, age 61, both hemispheres 401.4
2803 Female, age 91, both hemispheres 362.2
2093 Male, age 80, both hemispheres 312.2
2801 Male, age 74, both hemispheres 308.1
2743 Female, age 85, both hemispheres 294.1
2134 Male, age 76, both hemispheres 221.1
Motor hypoglossal nucleus
nTPM: 285.1
2132 Female, age 85, both hemispheres 339.0
2182 Male, age 80, both hemispheres 336.2
2125 Female, age 91, both hemispheres 333.2
2461 Male, age 61, both hemispheres 211.5
2277 Male, age 76, both hemispheres 205.9
Nucleus ambiguus
nTPM: 304.7
2071 Male, age 76, both hemispheres 359.1
2096 Female, age 85, both hemispheres 250.3
Nucleus cuneatus
nTPM: 309.1
2805 Female, age 91, both hemispheres 387.1
2808 Female, age 85, both hemispheres 370.9
2564 Male, age 74, both hemispheres 347.5
2562 Male, age 61, both hemispheres 341.7
2380 Male, age 80, both hemispheres 318.9
2376 Male, age 61, both hemispheres 289.7
2381 Male, age 80, both hemispheres 288.7
2100 Male, age 76, both hemispheres 220.1
2131 Male, age 76, both hemispheres 217.6
Nucleus gracilis
nTPM: 355.6
2627 Male, age 74, both hemispheres 363.1
2299 Female, age 85, both hemispheres 355.4
2382 Male, age 80, both hemispheres 348.2
Nucleus raphe obscurus
nTPM: 380.9
2845 Female, age 85, midline 413.0
2800 Male, age 61, midline 379.2
2142 Male, age 76, midline 350.6
Nucleus raphe pallidus
nTPM: 361.8
1924 Male, age 61, midline 446.4
2183 Male, age 80, midline 320.6
2145 Male, age 76, midline 318.3
Nucleus tractus solitarii
nTPM: 247.3
2191 Female, age 85, both hemispheres 286.7
2144 Female, age 91, right hemisphere 271.3
2656 Male, age 76, both hemispheres 225.3
2307 Male, age 80, both hemispheres 205.9
Parvicellular reticular nuclei
nTPM: 294.6
2095 Male, age 76, both hemispheres 317.6
2119 Male, age 80, both hemispheres 298.9
2558 Male, age 74, both hemispheres 267.4
Parvicellular reticular nuclei, medullary
nTPM: 300.8
2091 Female, age 85, both hemispheres 317.2
2189 Female, age 91, both hemispheres 300.8
2181 Male, age 80, left hemisphere 284.5
Peritrigeminal nucleus
nTPM: 338.1
2067 Female, age 85, both hemispheres 421.4
2136 Male, age 76, both hemispheres 318.7
2179 Male, age 61, both hemispheres 274.3
Prepositus hypoglossal nucleus
nTPM: 330.8
2855 Female, age 85, right hemisphere 357.4
2086 Male, age 80, both hemispheres 304.2
Spinal trigeminal nucleus, caudal
nTPM: 286.6
2642 Male, age 74, both hemispheres 307.1
2312 Male, age 61, both hemispheres 298.1
2308 Male, age 80, both hemispheres 287.9
2390 Female, age 91, both hemispheres 283.5
2447 Male, age 76, both hemispheres 256.1
Spinal trigeminal nucleus, interpolar
nTPM: 297.8
2389 Female, age 91, both hemispheres 333.4
2625 Male, age 61, both hemispheres 319.1
2033 Male, age 80, both hemispheres 290.2
2066 Male, age 76, right hemisphere 279.3
2386 Female, age 85, both hemispheres 267.0
Spinal vestibular nucleus
nTPM: 348.3
2796 Male, age 61, both hemispheres 411.5
2384 Male, age 74, both hemispheres 382.9
2806 Female, age 85, both hemispheres 367.1
2780 Male, age 80, both hemispheres 323.5
2748 Male, age 76, both hemispheres 305.8
2186 Female, age 91, both hemispheres 299.2
Superior vestibular nucleus
nTPM: 333.8
2015 Male, age 80, both hemispheres 370.6
2383 Male, age 74, both hemispheres 327.2
2061 Male, age 76, both hemispheres 303.6
Ventral medullary reticular nucleus
nTPM: 335.1
2372 Male, age 61, both hemispheres 391.5
2060 Male, age 76, both hemispheres 278.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 347.6
2118 Male, age 80, both hemispheres 408.4
2302 Female, age 91, both hemispheres 367.9
2741 Female, age 85, both hemispheres 327.3
2180 Male, age 61, both hemispheres 317.4
1986 Male, age 76, both hemispheres 317.0

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

378.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 378.4
FF:10174-103C3 60 years, female 415.2
FF:10038-101F2 18-64 years, mixed 382.8
FF:10155-103A2 76 years, female 337.3

MEDULLA OBLONGATA - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

230.0
Macaque sample Sample description nTPM
Medulla oblongata
nTPM: 230.0
Samples: 1

Max nTPM: 230.0
Min nTPM: 230.0
Sample A 230.0

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.3
Sample C Male 0.0
Sample D Male 0.0

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