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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:52.8 nTPM
HPA Brain:149.2 nTPM
GTEx:52.8 nTPM
Pig:42.8 nTPM
Mouse:74.3 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 52.0
1961 Female, age 42, unknown 52.1
2226 Male, age 75, left hemisphere 51.9
Dorsomedial nucleus
nTPM: 86.3
2017 Female, age 42, unknown 126.0
1989 Male, age 62, unknown 75.0
2041 Female, age 72, unknown 57.8
Lateral hypothalamic area
nTPM: 102.3
2271 Male, age 75, both hemispheres 111.6
2228 Male, age 66, unknown 111.5
2412 Male, age 62, unknown 96.1
1791 Male, age 80, right hemisphere 90.2
Mammillary body
nTPM: 149.2
1945 Male, age 80, right hemisphere 190.1
1948 Female, age 72, unknown 172.3
1834 Female, age 42, unknown 168.6
2413 Male, age 66, unknown 108.6
1923 Female, age 72, unknown 106.5
Paraventricular nucleus
nTPM: 148.9
2700 Male, age 62, unknown 148.9
Preoptic area
nTPM: 118.0
2414 Female, age 72, unknown 189.2
1861 Female, age 42, unknown 101.2
1907 Male, age 80, right hemisphere 63.6
Supraoptic nucleus
nTPM: 109.1
2043 Male, age 62, unknown 163.0
1894 Female, age 72, unknown 87.4
2835 Female, age 72, unknown 76.8
Ventromedial nucleus
nTPM: 48.2
1822 Female, age 42, unknown 48.9
1982 Female, age 72, unknown 47.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 52.8
Samples: 257

Max nTPM: 370.8
Min nTPM: 12.0
Std nTPM: 46.1
Median nTPM: 36.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 370.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 281.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 226.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 217.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 205.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 204.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 185.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 173.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 160.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 159.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 154.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 154.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 154.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 149.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 145.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 134.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 133.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 127.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 125.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 121.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 119.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 118.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 107.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 107.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 105.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 104.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 101.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 98.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 97.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 96.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 94.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 94.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 94.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 93.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 91.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 90.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 89.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 85.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 84.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 83.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 83.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 81.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 81.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 79.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 77.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 77.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 77.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 75.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 75.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 75.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 75.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 73.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 72.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 72.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 72.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 66.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 65.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 65.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 65.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 64.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 63.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 63.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 62.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 61.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 60.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 60.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 59.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 59.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 59.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 59.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 58.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 58.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 57.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 57.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 57.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 56.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 56.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 54.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 53.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 53.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 52.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 52.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 51.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 50.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 50.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 50.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 49.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 49.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 48.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 48.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 47.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 47.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 45.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 45.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 45.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 44.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 42.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 42.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 42.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 42.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 42.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 42.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 42.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 41.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 41.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 41.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 41.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 41.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 40.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 40.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 40.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 39.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 39.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 39.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 39.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 39.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 39.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 39.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 39.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 39.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 38.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 38.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 38.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 37.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 37.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 36.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 36.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 36.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 36.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 35.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 35.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 35.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 35.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 35.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 34.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 34.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 34.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 34.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 33.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 33.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 33.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 33.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 33.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 33.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 32.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 32.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 32.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 32.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 32.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 32.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 31.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 31.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 31.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 30.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 30.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 30.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 30.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 29.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 29.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 29.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 29.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 29.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 29.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 29.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 28.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 28.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 28.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 28.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 28.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 28.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 28.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 28.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 28.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 27.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 27.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 27.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 27.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 27.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 27.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 27.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 27.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 27.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 27.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 27.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 26.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 26.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 26.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 26.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 26.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 26.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 26.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 26.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 25.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 25.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 25.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 25.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 25.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 24.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 24.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 24.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 24.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 24.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 24.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 24.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 24.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 23.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 23.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 23.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 23.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 23.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 22.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 22.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 22.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 22.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 22.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 22.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 22.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 21.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 21.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 20.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 20.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 20.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 20.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 20.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 20.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 20.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 20.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 20.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 20.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 20.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 20.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 19.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 19.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 19.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 19.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 19.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 19.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 19.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 19.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 18.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 18.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 18.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 18.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 18.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 18.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 18.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 18.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 17.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 17.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 16.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 16.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 16.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 16.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 12.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 12.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 12.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 42.8
Samples: 4

Max nTPM: 49.3
Min nTPM: 27.6
Sample A Female 46.1
Sample B Female 48.3
Sample C Male 49.3
Sample D Male 27.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 74.3
Samples: 4

Max nTPM: 84.1
Min nTPM: 65.0
Sample A Male 65.7
Sample B Male 65.0
Sample C Female 84.1
Sample D Female 82.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
945 Antisense, RP_Baylor_103028, Mouse strain C57BL/6J (56 days, male) 0.1
947 Antisense, RP_Baylor_103028, Mouse strain C57BL/6J (56 days, male) 0.1

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