HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Neuronal cells: Low
Neuronal projections: Not detected
Synapses: Not detected
RNA expressioni
Consensus:39.3 nTPM
HPA Brain:64.3 nTPM
GTEx:39.3 nTPM
FANTOM5:89.5 Scaled Tags Per Million
Pig:45.4 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Extended tissue profilei , antibody HPA050902
Glial cells Not detected
Neuronal cells Low
Neuronal projections Not detected
Synapses Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 64.3
Sample id Sample description nTPM
Hippocampus
nTPM: 50.5
2621 Female, age 67, right hemisphere 56.8
2148 Female, age 91, left hemisphere 52.6
1855 Male, age 76, left hemisphere 49.6
1911 Female, age 85, right hemisphere 49.2
2529 Female, age 94, left hemisphere 49.0
1898 Male, age 80, left hemisphere 45.9
Dentate gyrus
nTPM: 61.3
2531 Female, age 67, both hemispheres 87.5
1927 Female, age 91, both hemispheres 65.4
2246 Female, age 85, both hemispheres 64.8
2530 Female, age 94, left hemisphere 55.6
2528 Male, age 74, both hemispheres 49.6
2010 Male, age 76, both hemispheres 44.8
Entorhinal gyrus
nTPM: 11.1
2117 Female, age 91, right hemisphere 18.3
1787 Male, age 76, left hemisphere 14.6
1938 Female, age 85, left hemisphere 9.8
2764 Male, age 80, right hemisphere 9.6
2686 Male, age 75, right hemisphere 8.0
2613 Female, age 94, left hemisphere 6.3
Hippocampus, CA1
nTPM: 60.8
2045 Male, age 76, both hemispheres 75.0
2082 Female, age 91, right hemisphere 65.6
2749 Male, age 80, left hemisphere 62.9
1873 Female, age 85, both hemispheres 51.2
2527 Male, age 74, both hemispheres 49.5
Hippocampus, CA2
nTPM: 35.0
2113 Female, age 91, right hemisphere 50.0
2249 Male, age 74, both hemispheres 42.6
1892 Male, age 76, both hemispheres 36.0
1963 Male, age 80, left hemisphere 35.8
2437 Female, age 94, left hemisphere 22.9
1940 Female, age 85, left hemisphere 22.8
Hippocampus, CA3
nTPM: 64.3
2620 Female, age 94, left hemisphere 135.7
2861 Female, age 67, both hemispheres 74.9
2137 Male, age 80, left hemisphere 68.0
2436 Male, age 74, both hemispheres 39.6
1867 Male, age 76, both hemispheres 37.5
1891 Female, age 85, both hemispheres 29.9
Parahippocampal cortex
nTPM: 19.2
2245 Female, age 91, both hemispheres 48.1
2250 Female, age 67, right hemisphere 37.9
2018 Male, age 76, both hemispheres 31.1
1933 Female, age 85, both hemispheres 30.0
2693 Female, age 94, both hemispheres 13.6
1990 Female, age 91, right hemisphere 8.0
2622 Female, age 67, right hemisphere 7.7
1850 Male, age 80, both hemispheres 5.2
2532 Female, age 72, left hemisphere 5.0
2692 Male, age 74, both hemispheres 5.0
Perirhinal gyrus
nTPM: 20.5
1847 Female, age 91, left hemisphere 37.0
2521 Female, age 94, right hemisphere 33.7
1794 Male, age 80, right hemisphere 11.8
2848 Male, age 76, right hemisphere 10.7
1841 Female, age 85, right hemisphere 9.2
Subiculum
nTPM: 23.0
2729 Female, age 91, right hemisphere 37.6
1977 Female, age 85, both hemispheres 28.6
1901 Male, age 80, both hemispheres 27.4
2042 Male, age 76, both hemispheres 26.1
2619 Male, age 74, both hemispheres 10.8
2438 Female, age 94, left hemisphere 7.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 39.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.3
Samples: 255

Max nTPM: 133.2
Min nTPM: 1.0
Std nTPM: 28.5
Median nTPM: 33.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 133.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 120.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 118.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 113.5
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 107.3
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 103.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 103.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 103.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 100.4
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 100.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 99.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.5
FF:10169-103B7 60 years, female 151.6
FF:10153-102I9 76 years, female 27.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 45.4
Pig sample Sample description nTPM
Subiculum
nTPM: 45.2
Samples: 4

Max nTPM: 54.7
Min nTPM: 38.2
Sample A Female 54.7
Sample B Female 41.4
Sample C Male 46.4
Sample D Male 38.2
Dorsal hippocampus
nTPM: 38.8
Samples: 4

Max nTPM: 53.9
Min nTPM: 26.3
Sample A Female 53.9
Sample B Female 45.7
Sample C Male 26.3
Sample D Male 29.1
Entorhinal cortex
nTPM: 41.8
Samples: 4

Max nTPM: 47.3
Min nTPM: 37.7
Sample A Female 47.3
Sample B Female 38.0
Sample C Male 44.3
Sample D Male 37.7
Ventral hippocampus
nTPM: 45.4
Samples: 4

Max nTPM: 55.9
Min nTPM: 31.5
Sample A Female 40.1
Sample B Female 31.5
Sample C Male 55.9
Sample D Male 54.0

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