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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
326.7
nTPM
Monaco:
619.7
nTPM
Schmiedel:
632.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
326.7
HPA sample
nTPM
gdT-cell nTPM: 244.2
Samples: 6
Max nTPM: 330.4
Min nTPM: 198.2
P10809_1007
198.2
P10809_1022
330.4
P10809_1041
264.7
P10809_1060
206.9
P10809_1077
216.9
P10809_1098
248.0
MAIT T-cell nTPM: 258.8
Samples: 6
Max nTPM: 362.5
Min nTPM: 193.7
P10809_1006
237.9
P10809_1024
362.5
P10809_1043
274.9
P10809_1062
249.1
P10809_1083
193.7
P10809_1097
234.7
Memory CD4 T-cell nTPM: 270.2
Samples: 6
Max nTPM: 322.8
Min nTPM: 227.8
P10809_1014
254.8
P10809_1026
296.9
P10809_1045
322.8
P10809_1064
227.8
P10809_1086
238.0
P10809_1113
281.0
Memory CD8 T-cell nTPM: 269.2
Samples: 5
Max nTPM: 304.6
Min nTPM: 234.7
P10809_1012
243.7
P10809_1027
286.7
P10809_1046
304.6
P10809_1065
234.7
P10809_1111
276.5
Naive CD4 T-cell nTPM: 294.1
Samples: 6
Max nTPM: 398.7
Min nTPM: 255.1
P10809_1015
255.1
P10809_1030
299.0
P10809_1049
398.7
P10809_1068
271.3
P10809_1085
258.2
P10809_1112
282.3
Naive CD8 T-cell nTPM: 263.3
Samples: 6
Max nTPM: 295.7
Min nTPM: 233.9
P10809_1016
237.1
P10809_1031
287.4
P10809_1050
278.5
P10809_1069
247.1
P10809_1087
233.9
P10809_1110
295.7
T-reg nTPM: 326.7
Samples: 6
Max nTPM: 379.5
Min nTPM: 284.6
P10809_1018
301.2
P10809_1037
327.2
P10809_1056
322.6
P10809_1075
284.6
P10809_1094
345.1
P10809_1106
379.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
619.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 514.7
Samples: 4
Max nTPM: 569.3
Min nTPM: 455.1
RHH5202_R3573
569.3
RHH5230_R3602
544.1
RHH5259_R3631
455.1
RHH5288_R3660
490.3
Effector memory CD8 T-cell nTPM: 616.2
Samples: 4
Max nTPM: 660.6
Min nTPM: 586.8
RHH5203_R3574
660.6
RHH5231_R3603
588.2
RHH5260_R3632
586.8
RHH5289_R3661
629.0
MAIT T-cell nTPM: 552.7
Samples: 4
Max nTPM: 666.2
Min nTPM: 474.0
RHH5233_R3605
512.7
RHH5205_R3576
666.2
RHH5262_R3634
557.9
RHH5297_R3663
474.0
Memory CD4 T-cell TFH nTPM: 530.6
Samples: 4
Max nTPM: 577.9
Min nTPM: 462.3
RHH5300_R3666
462.3
RHH5236_R3608
571.0
RHH5265_R3637
511.3
RHH5208_R3579
577.9
Memory CD4 T-cell Th1 nTPM: 497.9
Samples: 4
Max nTPM: 541.6
Min nTPM: 441.8
RHH5210_R3581
506.3
RHH5302_R3668
501.7
RHH5238_R3610
441.8
RHH5267_R3639
541.6
Memory CD4 T-cell Th1/Th17 nTPM: 543.5
Samples: 4
Max nTPM: 629.3
Min nTPM: 445.2
RHH5303_R3669
572.2
RHH5211_R3582
629.3
RHH5239_R3611
527.3
RHH5268_R3640
445.2
Memory CD4 T-cell Th17 nTPM: 619.7
Samples: 4
Max nTPM: 749.5
Min nTPM: 501.5
RHH5304_R3670
605.8
RHH5212_R3583
621.9
RHH5240_R3612
749.5
RHH5269_R3641
501.5
Memory CD4 T-cell Th2 nTPM: 551.1
Samples: 4
Max nTPM: 603.7
Min nTPM: 488.7
RHH5305_R3671
488.7
RHH5213_R3584
580.9
RHH5241_R3613
603.7
RHH5270_R3642
531.0
Naive CD4 T-cell nTPM: 530.2
Samples: 4
Max nTPM: 554.5
Min nTPM: 508.6
RHH5306_R3672
508.6
RHH5214_R3585
535.1
RHH5242_R3614
522.5
RHH5271_R3643
554.5
Naive CD8 T-cell nTPM: 540.7
Samples: 4
Max nTPM: 616.1
Min nTPM: 477.3
RHH5201_R3572
616.1
RHH5229_R3601
477.3
RHH5258_R3630
491.4
RHH5287_R3659
577.8
Non-Vd2 gdTCR nTPM: 558.1
Samples: 4
Max nTPM: 609.7
Min nTPM: 453.4
RHH5235_R3607
576.8
RHH5264_R3636
609.7
RHH5207_R3578
592.5
RHH5299_R3665
453.4
T-reg nTPM: 487.5
Samples: 4
Max nTPM: 550.7
Min nTPM: 432.6
RHH5301_R3667
432.6
RHH5237_R3609
550.7
RHH5266_R3638
457.6
RHH5209_R3580
509.0
Terminal effector memory CD4 T-cell nTPM: 568.9
Samples: 2
Max nTPM: 606.7
Min nTPM: 531.0
RHH5243_R3615
606.7
RHH5272_R3644
531.0
Terminal effector memory CD8 T-cell nTPM: 516.6
Samples: 4
Max nTPM: 548.0
Min nTPM: 464.1
RHH5232_R3604
532.5
RHH5204_R3575
464.1
RHH5261_R3633
548.0
RHH5296_R3662
521.7
Vd2 gdTCR nTPM: 503.9
Samples: 4
Max nTPM: 608.2
Min nTPM: 431.0
RHH5234_R3606
489.1
RHH5206_R3577
487.3
RHH5263_R3635
608.2
RHH5298_R3664
431.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.