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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • TOMM7
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:205.2 nTPM
GTEx:864.4 nTPM
FANTOM5:262.4 Scaled Tags Per Million
Macaque:161.9 nTPM
Pig:108.7 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.2
Sample id Sample description nTPM
Putamen
nTPM: 205.2
2466 Female, age 79, unknown 243.9
1838 Male, age 80, right hemisphere 239.1
1937 Female, age 91, right hemisphere 225.2
1829 Male, age 74, unknown 210.0
2482 Female, age 94, left hemisphere 198.7
2647 Male, age 75, left hemisphere 171.1
2489 Female, age 72, unknown 148.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

864.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 864.4
Samples: 254

Max nTPM: 1953.9
Min nTPM: 427.1
Std nTPM: 235.8
Median nTPM: 818.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1953.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1911.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1839.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1566.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1544.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1543.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1503.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1467.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1379.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1349.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1333.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1305.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1268.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1234.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1227.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1193.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1184.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1169.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1164.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1151.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1148.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1148.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1147.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1139.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1132.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1121.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1118.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1118.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1115.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1113.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1099.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1092.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1090.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1090.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1087.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1086.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1080.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1078.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1078.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1073.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1072.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1063.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1063.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1061.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1059.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1039.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1033.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1031.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1029.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1027.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1027.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1021.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1019.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1014.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1011.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1011.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1007.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1006.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1002.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1002.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1001.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 997.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 996.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 995.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 990.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 986.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 984.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 983.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 971.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 968.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 967.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 965.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 961.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 960.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 960.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 959.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 954.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 949.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 946.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 944.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 942.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 940.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 939.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 938.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 936.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 924.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 922.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 920.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 914.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 914.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 911.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 908.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 907.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 906.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 903.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 900.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 900.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 896.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 884.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 883.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 877.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 876.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 871.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 869.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 864.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 861.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 860.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 854.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 852.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 852.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 852.3
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 844.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 840.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 839.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 837.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 836.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 835.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 834.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 831.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 830.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 829.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 829.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 826.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 823.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 821.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 818.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 818.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 818.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 816.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 814.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 812.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 809.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 809.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 808.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 806.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 805.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 804.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 803.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 801.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 800.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 798.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 793.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 792.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 792.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 790.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 788.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 788.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 788.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 784.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 783.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 782.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 782.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 780.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 779.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 778.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 778.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 777.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 774.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 771.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 768.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 768.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 768.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 768.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 764.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 760.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 759.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 756.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 753.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 753.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 747.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 746.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 746.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 744.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 741.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 741.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 738.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 738.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 736.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 735.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 732.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 731.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 730.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 728.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 727.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 725.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 721.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 720.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 716.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 714.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 713.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 713.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 710.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 707.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 705.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 694.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 689.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 687.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 686.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 685.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 685.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 685.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 684.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 684.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 684.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 682.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 680.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 678.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 676.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 671.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 671.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 670.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 668.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 666.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 665.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 664.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 664.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 660.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 651.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 646.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 630.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 625.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 621.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 621.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 615.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 612.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 610.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 604.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 602.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 602.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 601.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 600.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 596.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 592.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 591.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 589.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 583.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 576.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 575.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 571.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 556.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 555.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 551.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 547.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 544.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 543.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 540.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 529.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 522.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 513.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 513.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 506.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 494.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 471.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 427.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

262.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 262.4
FF:10176-103C5 60 years, female 262.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.9
Macaque sample Sample description nTPM
Putamen
nTPM: 162.0
Samples: 2

Max nTPM: 164.2
Min nTPM: 159.7
Sample A 159.7
Sample B 164.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.7
Pig sample Sample description nTPM
Putamen
nTPM: 108.7
Samples: 3

Max nTPM: 135.7
Min nTPM: 88.3
Sample B Female 88.3
Sample C Male 135.7
Sample D Male 102.0

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