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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.1
nTPM
Monaco:
188.5
nTPM
Schmiedel:
89.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.1
HPA sample
nTPM
gdT-cell nTPM: 67.1
Samples: 6
Max nTPM: 82.2
Min nTPM: 40.5
P10809_1007
76.3
P10809_1022
76.1
P10809_1041
82.2
P10809_1060
40.5
P10809_1077
59.2
P10809_1098
68.1
MAIT T-cell nTPM: 78.1
Samples: 6
Max nTPM: 94.5
Min nTPM: 62.6
P10809_1006
94.5
P10809_1024
89.4
P10809_1043
68.2
P10809_1062
85.8
P10809_1083
68.2
P10809_1097
62.6
Memory CD4 T-cell nTPM: 50.2
Samples: 6
Max nTPM: 61.6
Min nTPM: 34.7
P10809_1014
61.6
P10809_1026
55.5
P10809_1045
52.6
P10809_1064
34.7
P10809_1086
43.2
P10809_1113
53.3
Memory CD8 T-cell nTPM: 54.0
Samples: 5
Max nTPM: 69.6
Min nTPM: 34.1
P10809_1012
69.6
P10809_1027
52.3
P10809_1046
66.4
P10809_1065
34.1
P10809_1111
47.5
Naive CD4 T-cell nTPM: 35.0
Samples: 6
Max nTPM: 41.2
Min nTPM: 28.3
P10809_1015
41.2
P10809_1030
31.3
P10809_1049
28.3
P10809_1068
32.3
P10809_1085
41.0
P10809_1112
36.1
Naive CD8 T-cell nTPM: 39.9
Samples: 6
Max nTPM: 47.5
Min nTPM: 35.7
P10809_1016
47.5
P10809_1031
42.7
P10809_1050
41.7
P10809_1069
35.9
P10809_1087
35.7
P10809_1110
36.1
T-reg nTPM: 43.6
Samples: 6
Max nTPM: 70.0
Min nTPM: 29.6
P10809_1018
60.0
P10809_1037
39.1
P10809_1056
29.6
P10809_1075
31.1
P10809_1094
70.0
P10809_1106
31.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
188.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 123.1
Samples: 4
Max nTPM: 159.2
Min nTPM: 96.6
RHH5202_R3573
96.6
RHH5230_R3602
104.7
RHH5259_R3631
159.2
RHH5288_R3660
131.9
Effector memory CD8 T-cell nTPM: 147.1
Samples: 4
Max nTPM: 170.9
Min nTPM: 115.9
RHH5203_R3574
133.6
RHH5231_R3603
115.9
RHH5260_R3632
170.9
RHH5289_R3661
167.8
MAIT T-cell nTPM: 188.5
Samples: 4
Max nTPM: 240.9
Min nTPM: 163.3
RHH5233_R3605
165.6
RHH5205_R3576
240.9
RHH5262_R3634
184.1
RHH5297_R3663
163.3
Memory CD4 T-cell TFH nTPM: 110.7
Samples: 4
Max nTPM: 125.3
Min nTPM: 96.2
RHH5300_R3666
125.3
RHH5236_R3608
96.2
RHH5265_R3637
102.7
RHH5208_R3579
118.4
Memory CD4 T-cell Th1 nTPM: 128.5
Samples: 4
Max nTPM: 173.3
Min nTPM: 104.7
RHH5210_R3581
114.5
RHH5302_R3668
104.7
RHH5238_R3610
173.3
RHH5267_R3639
121.5
Memory CD4 T-cell Th1/Th17 nTPM: 167.9
Samples: 4
Max nTPM: 192.7
Min nTPM: 150.2
RHH5303_R3669
192.7
RHH5211_R3582
153.5
RHH5239_R3611
175.3
RHH5268_R3640
150.2
Memory CD4 T-cell Th17 nTPM: 175.8
Samples: 4
Max nTPM: 212.8
Min nTPM: 140.4
RHH5304_R3670
194.4
RHH5212_R3583
140.4
RHH5240_R3612
212.8
RHH5269_R3641
155.4
Memory CD4 T-cell Th2 nTPM: 168.5
Samples: 4
Max nTPM: 217.5
Min nTPM: 139.4
RHH5305_R3671
155.1
RHH5213_R3584
217.5
RHH5241_R3613
161.9
RHH5270_R3642
139.4
Naive CD4 T-cell nTPM: 83.9
Samples: 4
Max nTPM: 92.8
Min nTPM: 74.6
RHH5306_R3672
77.5
RHH5214_R3585
74.6
RHH5242_R3614
90.8
RHH5271_R3643
92.8
Naive CD8 T-cell nTPM: 117.2
Samples: 4
Max nTPM: 146.8
Min nTPM: 91.9
RHH5201_R3572
91.9
RHH5229_R3601
146.8
RHH5258_R3630
107.4
RHH5287_R3659
122.6
Non-Vd2 gdTCR nTPM: 120.1
Samples: 4
Max nTPM: 133.2
Min nTPM: 97.2
RHH5235_R3607
133.2
RHH5264_R3636
125.6
RHH5207_R3578
97.2
RHH5299_R3665
124.2
T-reg nTPM: 109.6
Samples: 4
Max nTPM: 135.4
Min nTPM: 92.4
RHH5301_R3667
92.4
RHH5237_R3609
135.4
RHH5266_R3638
95.5
RHH5209_R3580
115.2
Terminal effector memory CD4 T-cell nTPM: 135.5
Samples: 2
Max nTPM: 137.2
Min nTPM: 133.8
RHH5243_R3615
133.8
RHH5272_R3644
137.2
Terminal effector memory CD8 T-cell nTPM: 133.9
Samples: 4
Max nTPM: 152.3
Min nTPM: 108.4
RHH5232_R3604
140.3
RHH5204_R3575
108.4
RHH5261_R3633
152.3
RHH5296_R3662
134.6
Vd2 gdTCR nTPM: 146.6
Samples: 4
Max nTPM: 173.9
Min nTPM: 113.8
RHH5234_R3606
154.8
RHH5206_R3577
113.8
RHH5263_R3635
173.9
RHH5298_R3664
144.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.